Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01975 ATGGAAATGCCTGCAAGAAGATCTAATTACTCGCTTCTAAGTCAAGTTCCCGACGATCAATTTTCCTACGCCGCCGGAGCTAGTGCTCCGTCGTCATCCAGCGACGGAAAAGCTAGTAGAGGCGGTAAGTTAGATAGAGGTTTCGATTGGGAGTTAGTCGGCGATCATAGGTCGCAAGGGAACAATCGGATCGGGAATTTGTATACTTCGATCGGGTTACAGAGGCAGTCTAGCGGGAGTAGTTATGGTGAAAGCTCGCTTTCCGGTGGCGGTGATTATTATGCTCAGACGTTGTCGACGGCGGCGGCTAGTGAGGTTGATGCGTTTGGTTATTTGCACGATGATGGATTTAAGGTTGGTGATGTGAGGAATAAGTTGTTGGAAGGTCCGGCGTGGACCGGCGGGTCTTCAGGGAAGAGCTGGGCGCAGCAAACGGAGGAGAGTTATCAGTTGCAGCTTGCTTTGGCACTGCGGTTGTCGTCGGATGCTACTTGTGCTGATGATCCGAATTTTTTGGATCCGGTGCCGGATGAAGCTGCTTCGAGGTTATCGGCTTCCCCTGAGGCTGTTTCGCATAGATTTTGGGTGAATGGCTGCCTATCATACTCTGACAAAATTCCCGATGGCTTTTACCTAATTCATGGGATGGATTCCTATGTCTGGACAGTGTGCACTGATCTGCAGGAAAACAGCCGAATCCCGTCAGTTGATACCCTAAAGTCTGTACATCCCCGCATCGATTCTTCACTTGAAGTAGTTTTGGTGGATAGACGCGGTGACCCCACCTTGAGAGAATTGCAAAACATAGTTCATAACATTTCTTGTAGCAGCATAACAACAACAGAGGTTGTGGATCAGCTTTCAAAGCTGGTTTGCAACTGTATGGGgggttcagcttctgctggggaggatgagtttctttcttTCTGGAGGGATCGCAGTAATAATCTGAAAGATTGCTTAGGATCTGTTGTTTTTCCAATAGGTAGTCTATCTGTCGGCCTCTGCAGGCATCGTGCCATATTATTCAAAGTACTAGCTGATGCTATTGATTTACCTTGTCGAATTGCAAAGGGCTGTAGATATTGCAAAAGAGACGACGCTTCTTCTTGTCTTGTTCGATTTGGGCTTGAAAGGGAATATCTTGTTGATTTAATTGGGAAGCCAGGACACTTATGGGAGCCTGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTGTTCACCCTTGCGCTTTCCAAGACTTAAACCAGCTGAAACTACAATTGATTTCAGGTCACTGGCTAAACAGTATTTCTCAGACTGTCTGTCTCTTGAGCTTGTCTTCAATGACAGTTCTGCAGAACAGTTTGATGGGAAATGCAATGAAAGGAATAACCTTAGGCCAATTTCAAGTGACAGCAACAGACCTTCTCAATTTCCTTTGTTTCTGCAATCTTCTCTTCCAAGCACACATGATCAAGGTTCTGAAACATATGTGTCATCTAACCATCCCCAGAACATTATAGACTCAACAATTGTGGGCAAGTATCCACCGCCTATAAAGAATAAGCGCCCTGTTGGTGTACAAGCCCAGGTGGCACTAACAAATGCCAATGATGATGTCATTGAGGCTAGGAGGTTTGTTGAAGGAAGTCAACTGATTCCTAGCAGACCTACTCGAGAGGTTGCCTTTGACATGGAGGATTTGGCCATACCATGGAGTGATCTTATTTTAAAAGAAAAAATAGGATCAGGTTCTTTTGGAACTGTACATCGTGCTGAGTGGAATGGCTCGGATGTTGCTGTGAAAATTTTGATGGAGCAAGATTTTCATGCTGAACGCTTCAAGGAATTCATGAGGGAGGTTGCGATAATGAAATACTTGCGGCATCCAAATATTGTTTTATTAATGGGGGCAGTCACTCAACCTCCTAACTTATCAATTGTCACCGAATATTTATCAAGGGGTAGCTTATATAGGCTGTTGCATAGACCTGGTGCCAAAGAAGTGTTGGATGAGAGGCGCAGGCTTAGTATGGCTTACGATGTGGCCAAAGGGATGAATTATCTTCACAAGCGTAATCCTCCCATTGTTCATAGAGATCTGAAATCTCCAAATCTTCTTGTTGACAAGAAATACACAGTGAAGGTTTGTGATTTTGGGCTTTCCCGCTTAAAGGCCAATACATTTCTCTCTTCCAAGTCTGCTGCTGGGACTCCTGAGTGGATGGCTCCAGAAGTTCTTCGTGACGAGCCATCAAATGAGAAGTCCGATGTTTACAGCTTTGGGGTAATACTGTGGGAGATTGCAACGTTGCAACAGCCGTGGGGTAATTTGAATCCAGCACAGGTTGTCGCTGCTGTTGGCTTCAAGGGAAAAAGGCTTGAGATCCCACACGAGTTGAATCCCCAAATAGCTGCAATAATTGAGGCTTGCTGGGCCAATGAGCCCTGGAAACGCCCTTCTTTTGCCAGCATTATGGATTCTTTGAGGTCATTACTCAAACCCCCTACACCTCAACCTGGATTACACCGTTTTAGTAGCCATAGAGTCGAGTTGTATATTTCTTTTCTAATTCAGAGTTTGGAACAAAATTGCGCTTATGTACTAACACCTCAGATGGCAGATCTCTCTACACAAGGAAACAGATTGTCTACCGTCTGGGTGGGAAAGACGCCTTTCACTTTTCCGGTCCATCAGATGAATGTAACAGCTTTGGAAGGAGTCATGTGGTTTGATTCCAATTCTGATAATGACACCACCAACAATCACATTTGGAAGCGTTCAAGTCTTAAGCTTTGCACTTTGCACTTTGCTCAGCTCAAGGAAGCTGTAAGCGCTAGGATTGTGAGGTGGAATGACCTGGGTAAGAGGAGTTGA 2865 0.4454 MEMPARRSNYSLLSQVPDDQFSYAAGASAPSSSSDGKASRGGKLDRGFDWELVGDHRSQGNNRIGNLYTSIGLQRQSSGSSYGESSLSGGGDYYAQTLSTAAASEVDAFGYLHDDGFKVGDVRNKLLEGPAWTGGSSGKSWAQQTEESYQLQLALALRLSSDATCADDPNFLDPVPDEAASRLSASPEAVSHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENSRIPSVDTLKSVHPRIDSSLEVVLVDRRGDPTLRELQNIVHNISCSSITTTEVVDQLSKLVCNCMGGSASAGEDEFLSFWRDRSNNLKDCLGSVVFPIGSLSVGLCRHRAILFKVLADAIDLPCRIAKGCRYCKRDDASSCLVRFGLEREYLVDLIGKPGHLWEPDSLLNGPSSISFCSPLRFPRLKPAETTIDFRSLAKQYFSDCLSLELVFNDSSAEQFDGKCNERNNLRPISSDSNRPSQFPLFLQSSLPSTHDQGSETYVSSNHPQNIIDSTIVGKYPPPIKNKRPVGVQAQVALTNANDDVIEARRFVEGSQLIPSRPTREVAFDMEDLAIPWSDLILKEKIGSGSFGTVHRAEWNGSDVAVKILMEQDFHAERFKEFMREVAIMKYLRHPNIVLLMGAVTQPPNLSIVTEYLSRGSLYRLLHRPGAKEVLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEIATLQQPWGNLNPAQVVAAVGFKGKRLEIPHELNPQIAAIIEACWANEPWKRPSFASIMDSLRSLLKPPTPQPGLHRFSSHRVELYISFLIQSLEQNCAYVLTPQMADLSTQGNRLSTVWVGKTPFTFPVHQMNVTALEGVMWFDSNSDNDTTNNHIWKRSSLKLCTLHFAQLKEAVSARIVRWNDLGKRS 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01975 954 ProSiteProfiles Protein kinase domain profile. 571 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01975 954 SMART serkin_6 571 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01975 954 MobiDBLite consensus disorder prediction 23 42 - -
Car04g01975 954 Gene3D Transferase(Phosphotransferase) domain 1 650 835 - -
Car04g01975 954 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 129 834 - -
Car04g01975 954 Pfam Ethylene-responsive protein kinase Le-CTR1 188 392 - -
Car04g01975 954 CDD STKc_MAP3K-like 577 825 - -
Car04g01975 954 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 129 834 - -
Car04g01975 954 SUPERFAMILY Protein kinase-like (PK-like) 545 824 IPR011009 -
Car04g01975 954 Gene3D Phosphorylase Kinase; domain 1 564 649 - -
Car04g01975 954 PRINTS Tyrosine kinase catalytic domain signature 796 818 IPR001245 GO:0004672|GO:0006468
Car04g01975 954 PRINTS Tyrosine kinase catalytic domain signature 733 743 IPR001245 GO:0004672|GO:0006468
Car04g01975 954 PRINTS Tyrosine kinase catalytic domain signature 645 658 IPR001245 GO:0004672|GO:0006468
Car04g01975 954 PRINTS Tyrosine kinase catalytic domain signature 752 774 IPR001245 GO:0004672|GO:0006468
Car04g01975 954 PRINTS Tyrosine kinase catalytic domain signature 686 704 IPR001245 GO:0004672|GO:0006468
Car04g01975 954 Pfam Protein tyrosine and serine/threonine kinase 572 825 IPR001245 GO:0004672|GO:0006468
Car04g01975 954 ProSitePatterns Protein kinases ATP-binding region signature. 577 598 IPR017441 GO:0005524
Car04g01975 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 692 704 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01975 Car-Chr4 23577356 23588801 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01975 1 836 MAP Kinase Kinase Kinase AT5G03730 64.286 0.0 979
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Car04g01975 PK_Tyr_Ser-Thr 6.9e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01975 K14510 - gmx:100800648 1362.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01975 04 23577356 23588801 Car04g01975 04 23577356 23588801 ECH