Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01970 ATGGAAGAAACTATGAACAACAACAACAGTAATGTTGTTTCTTTAGGGTCACCAGAACAAGTAGTAACAAACACATTACCACAGCCAATGAACATGAACATAAACATGAGTGTTGGAAACACTGACACTACTACTGGAACAACAACAATGGTTCATGATGTGacaacaacaacaacaacaccaccaccaccaGGATTTAGTGGAGGAGGAAGCTTAGATTTGTTTGGTAAAAAAAAGAGAGGTCGACCAAGAAAATATGATTCAGAAGGGAACCTAAATTTGAGTTacaagaaaacaacaacaccaacatcaccacaaGGATTCACTTTGTCTTCAAATGACTTTTCATCCAAAAGGGGTCGTGGAAAATCAACTGGGTTTGGAAATTACCAAATTATTTCTTCTTTTGGTGAGGTGTTTGCAAGCACAGCTGTTGTGGATTTTACACCGCATGTAATCACAGTTTATACAGGAGAGGATGTTGCTGGAAAGATCTTGTCATTTGCACAGAAGAGTCCAAGAGGAATATGCATTCTTTCTGCCAATGGAGCTATCTCTCATGTCATACTACGCCAACCTGGTTCTTCTGGTAGCATATTGACTTATGAGGGTCGATTTGAGATTTTATCTTTGTCTGGATCATACACGGTCTCGGAAAGTAGTGGCATAAGAACTCGAAACGGTGGATTGAGTGTCTCGCTGGCCGGTCCTGATGGTCGGGTGATTGGTGGTGCTGTTGCTGGTCTACTTACAGCTGCTGGCCCTATTCAAATTGTAGTGGGAAGCTTCATGCCAAATGATCAGAAGACACTTAAAAGGAAGTACCAACGTCAACAAACCGTGGCATCTCCAAATAGTCCAGAAGCAGTGATAGCCGCTAGACCTATCTCACAAGCAAATACTCATGGTGAAAACTTTATGATACCTATTTCTCAATTACCAGATCAAATGCTGAGAGAATCTGTTGTCAGTGTTTCAAGTGGTGATAAGCAGAACTTAGATGATACACCTGATGCTGCTACTTGGAATGGTTCTGATGAATTCTCAGATCAAAGGACATCCCCTGATATCAATATTTCTTTGCCTGACGAATAG 1095 0.3863 MEETMNNNNSNVVSLGSPEQVVTNTLPQPMNMNINMSVGNTDTTTGTTTMVHDVTTTTTTPPPPGFSGGGSLDLFGKKKRGRPRKYDSEGNLNLSYKKTTTPTSPQGFTLSSNDFSSKRGRGKSTGFGNYQIISSFGEVFASTAVVDFTPHVITVYTGEDVAGKILSFAQKSPRGICILSANGAISHVILRQPGSSGSILTYEGRFEILSLSGSYTVSESSGIRTRNGGLSVSLAGPDGRVIGGAVAGLLTAAGPIQIVVGSFMPNDQKTLKRKYQRQQTVASPNSPEAVIAARPISQANTHGENFMIPISQLPDQMLRESVVSVSSGDKQNLDDTPDAATWNGSDEFSDQRTSPDINISLPDE 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01970 364 CDD DUF296 149 263 IPR005175 -
Car04g01970 364 Gene3D - 150 283 - -
Car04g01970 364 SUPERFAMILY AF0104/ALDC/Ptd012-like 148 268 - -
Car04g01970 364 MobiDBLite consensus disorder prediction 322 358 - -
Car04g01970 364 ProSiteProfiles PPC domain profile profile. 145 287 IPR005175 -
Car04g01970 364 MobiDBLite consensus disorder prediction 56 121 - -
Car04g01970 364 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 17 363 IPR039605 GO:0003680
Car04g01970 364 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 17 363 - -
Car04g01970 364 Pfam Plants and Prokaryotes Conserved (PCC) domain 150 263 IPR005175 -
Car04g01970 364 MobiDBLite consensus disorder prediction 92 121 - -
Car04g01970 364 MobiDBLite consensus disorder prediction 322 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01970 Car-Chr4 23466223 23469586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01970 65 302 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 50.000 7.05e-63 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01970 - - gmx:100779227 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01970 04 23466223 23469586 Car04g01970 04 23466223 23469586 ECH