Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01966 ATGGCATCTTGCGACGACGACGATGATTTCTCAATCCTCCGTGACGATAacccccactctcaccatcttcaccaaaccttcgctccacaccatcaccaccaccaccaccacTTCTCCACCGCATCAGTCCAACCTAAACCCGTCGCCGACGACGATACCGATGATTACGGAAATCCGTTCGATGACGACGCCGGAAGCGAGAAACGTAAGGATCGCGATGAGATCGGCGATGGAACGACGTCGTACGGGTTTAACAAAAGGTCGAAGTCGGTTTCAAGCGGCAACGGaggagtaagcgtaggagtaagcatcggagtaggaggaggagcagagtaTAGAAAAGATCGGGAAGAATGGAGCGATACAGCGATTGTTTGTTTACTGGAAGCTTACACGGAGAAGTTTACGCAGCTGAATCGGGGGAATCTGAGGGGAAGAGATTGGGAGGAAGTAGCGTCGGTGGTGAGTGAACGGTGCGAAAATCAATCGAAGAGTGTGGAACAGTGTAAGAACAAGGTTGATAACTTGAAGAAAAGGTATAAGCTGGAGAGGCATAGAATGAACAATGGATGCATTTCCACTAGTCATTGGCCTTGGTTTAAGCAGATGGAACACATCGTTGGAAATTCTCTTCCGTCAAAGTTCGCTGAAGAGGATAAAGCCATTGTTCCTGCTTCTAATTCGCCAAGGCAATCCAAGAGATATGGAGTGGCAACGTCCAGCAGTGGAGGTCAAGTAAACACCCTGAAATCCAAAGCATTGTCAAACCTTAGATGGCGGAGAGTTGTTCTAAAAATTAGTGGTGCAGCACTTACCGGATCTGATACCTGCAATATTGACCCCAAGGTGGCCATGTTAGTTTCAAGTGAAGTTGCAATAGCTTCCCGCCTTGGTGTGGAGGTAGCAATTGTTGTTGGAGGTCGTAATTTCTTCTGTGGAGATGCATGGGTAACTGCTACAGGTTTAGAAAGATGTACTGCATACCAAGTTGGCATGATGGCAACTGTGATGAACTCATTGTTGCTCCAATCAACTCTAGAGAAGATGGGTGTTCAGACTCGTGTACAAACTTCAGTTTCAATGCAGGAGTTTGCTGAACCATACAATAGACAACGGGCCATCAGGCATCTTGAGAAAGGAAGAGTTGTTATATTTGGTGGCATTGGTTTTGGTGCTGGCAATCCACTTTTCTCAACCGACATAGCTTCTGCTCTTCGGGCTTCAGAGCTTAATGCTCAGGCAGTCCTCAAAGGTACTAATGTAGATGGTGTATATGACTGTAACTCACGAGACAACAATTTCACTTTCGAGCACATATCCTTCAGGGAGCTAGTGTCTAGAGGTGTCGCCACTATGGATATGTCAGCCCTAACATTTTGTGAGGAAAATGCTATTCCTGGTAAGTTTCAGGTTGTCATGCTTTAG 1425 0.4246 MASCDDDDDFSILRDDNPHSHHLHQTFAPHHHHHHHHFSTASVQPKPVADDDTDDYGNPFDDDAGSEKRKDRDEIGDGTTSYGFNKRSKSVSSGNGGVSVGVSIGVGGGAEYRKDREEWSDTAIVCLLEAYTEKFTQLNRGNLRGRDWEEVASVVSERCENQSKSVEQCKNKVDNLKKRYKLERHRMNNGCISTSHWPWFKQMEHIVGNSLPSKFAEEDKAIVPASNSPRQSKRYGVATSSSGGQVNTLKSKALSNLRWRRVVLKISGAALTGSDTCNIDPKVAMLVSSEVAIASRLGVEVAIVVGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNSLLLQSTLEKMGVQTRVQTSVSMQEFAEPYNRQRAIRHLEKGRVVIFGGIGFGAGNPLFSTDIASALRASELNAQAVLKGTNVDGVYDCNSRDNNFTFEHISFRELVSRGVATMDMSALTFCEENAIPGKFQVVML 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01966 474 MobiDBLite consensus disorder prediction 24 40 - -
Car04g01966 474 PANTHER ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN 62 466 IPR011817 GO:0006221|GO:0009041
Car04g01966 474 MobiDBLite consensus disorder prediction 15 100 - -
Car04g01966 474 SUPERFAMILY Carbamate kinase-like 258 466 IPR036393 -
Car04g01966 474 Coils Coil 159 186 - -
Car04g01966 474 MobiDBLite consensus disorder prediction 81 99 - -
Car04g01966 474 Pfam Myb/SANT-like DNA-binding domain 116 206 IPR044822 -
Car04g01966 474 CDD AAK_UMPK-PyrH-Ec 260 466 IPR015963 GO:0005737|GO:0006221|GO:0033862
Car04g01966 474 Gene3D - 254 469 IPR036393 -
Car04g01966 474 MobiDBLite consensus disorder prediction 61 77 - -
Car04g01966 474 Pfam Amino acid kinase family 261 466 IPR001048 -
Car04g01966 474 PANTHER URIDYLATE KINASE 62 466 - -
Car04g01966 474 Gene3D - 119 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01966 Car-Chr4 23355396 23359357 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01966 92 210 Trihelix Transcription Factor Family AT3G14180 37.705 6.36e-18 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Car04g01966 AA_kinase 4.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01966 - - gmx:100805176 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01966 04 23355396 23359357 Car04g01966 04 23355396 23359357 ECH