Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01964 ATGGAAGCCAATGGAATTTTTTCTAACATCACTACTTCTGCTTTGTTAGGAGTAGTTGATATCCCTTTacaacaacaacaacaacagcaacaGAATCTTCAAATTCAACAAAATCCTCACCATTTGCATCATTCCCAAGTTGTTTCCTATGTTTCTCATCATCATGATACTGacaacaacacacatcaacaacaacaattgcaacaacCAATCAAGCATGGGTACCCTCCTTTTTCTTCATCCAATTCCAAAATCAaacaacaacaacaacaacaGAGTTCTCATTCTCAGCTTAGTGATGAAGATGAGCCAAATTTTCCAGCTGAAGAAAGTTCAGGTGGTGACCCGAAGAGGAAGATTTCACCATGGCAGAGAATGAAATGGACAGATACAATGGTAAGGCTTTTGATTATGGCTGTTTATTACATTGGTGATGAAGCTGGTTCTGAAGGGAACAATAATGATCCAATGAGTAAAAAGAAACCAAGTGGTTTGTTACAGAAGAAAGGGAAGTGGAAATCTGTTTCAAGGGCTATGATGGAAAAAGGGTTTTATGTTTCACCTCAACAATGTGAAGATAAGTTTAATGATTTGAATAAAAGGTATAAGAGGGTTAATGATATACTTGGAAAAGGAACAGCTTGTAGGGTTGTTGAAAATCAGAATTTGTTGGATTCAATGGATTTGACTACAAAGATGAAAGAAGAAGTTAGGAAATTGCTTAATTCTAAGCATCTTTTCTTTAGGGAAATGTGTGCTTATCATAATAGTTGTGGTCATGGTAGTGTTGTTGCTTCTTCTAATGTTcaacaacaacaagtagaaggtggaacaacaacaccaccaccacaagctcaaccacaacaacatcaacagcaacaattacaacaacaacagcagcaaTGTTTTCATTCATCAGAGAATGGTTTAAAGATGTTGAAAATCGGAAATGGTGAAGGGGAAGAGGAAGATGATGAGTCGGAGGACGATGATTCAGAGGATGATTCTGATGAGGAAGATGATGAATCAAGAGAAGGTGGTTCAAAGAATCAAATTGGTCATTTTAATGATCAAGATGAAGATGAAAATGATGGGAAGTTATTAACATCATCAAGGAAAAGGGCAAGAAAAGAAGGAGGATTTGCATTTTCAATGtcatcattatcatcatcaacagcattaacatccacattgatgcatcaAATGAAGAGTGAAATAAGTGGTGTGTTTCAAGATGGTGGTAAGAGTCCTTGGGAGAAAAAGCAATGGATAAGGAGTAAGATAATGATGTTGGAGGAGGAGAAAGTAAGGTATTTGTCACAAGAGTTTGAGCTTGAAAAACAAAGGTTGAAATGGGCAAGGTTTAGTAGCAAGAAAGAGAGGGAAATGGAGAGAGCTAAAGTTGAAAATGAAAGGAGGAGATTGGAGAATGAGAGAATGGTTTTGATTATAAGGCAGAAGGAGATTGAATTGATGAGTCTTcaacaacaacaacagcatcaacaacaacaTTCTTCTACCTAG 1524 0.3051 MEANGIFSNITTSALLGVVDIPLQQQQQQQQNLQIQQNPHHLHHSQVVSYVSHHHDTDNNTHQQQQLQQPIKHGYPPFSSSNSKIKQQQQQQSSHSQLSDEDEPNFPAEESSGGDPKRKISPWQRMKWTDTMVRLLIMAVYYIGDEAGSEGNNNDPMSKKKPSGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQNLLDSMDLTTKMKEEVRKLLNSKHLFFREMCAYHNSCGHGSVVASSNVQQQQVEGGTTTPPPQAQPQQHQQQQLQQQQQQCFHSSENGLKMLKIGNGEGEEEDDESEDDDSEDDSDEEDDESREGGSKNQIGHFNDQDEDENDGKLLTSSRKRARKEGGFAFSMSSLSSSTALTSTLMHQMKSEISGVFQDGGKSPWEKKQWIRSKIMMLEEEKVRYLSQEFELEKQRLKWARFSSKKEREMERAKVENERRRLENERMVLIIRQKEIELMSLQQQQQHQQQHSST 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01964 507 MobiDBLite consensus disorder prediction 61 101 - -
Car04g01964 507 PANTHER F16F4.11 PROTEIN-RELATED 5 507 - -
Car04g01964 507 MobiDBLite consensus disorder prediction 343 365 - -
Car04g01964 507 MobiDBLite consensus disorder prediction 148 169 - -
Car04g01964 507 Gene3D - 128 204 - -
Car04g01964 507 MobiDBLite consensus disorder prediction 317 365 - -
Car04g01964 507 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 5 507 - -
Car04g01964 507 Pfam Myb/SANT-like DNA-binding domain 125 253 IPR044822 -
Car04g01964 507 MobiDBLite consensus disorder prediction 269 303 - -
Car04g01964 507 Coils Coil 458 504 - -
Car04g01964 507 MobiDBLite consensus disorder prediction 49 123 - -
Car04g01964 507 MobiDBLite consensus disorder prediction 319 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01964 Car-Chr4 23330678 23332201 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Car04g01964 Myb_DNA-bind_4 6.1e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01964 - - cam:101509296 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01964 04 23330678 23332201 Car04g01964 04 23330678 23332201 ECH
Car03g02564 03 71499170 71501108 Car04g01964 04 23330678 23332201 PCT