Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01957 ATGGACACAATGTTGGTACCTCCATGGCTCAAACCACTTCTTAACACACCCTTTTTCAATGTGTGTCGGATTCATGGAGATGCTGCAAGGAGTGAATGTAACATGTTTTGTCTAGATTGCAATGTTGATGCCTTTTGCTTCTATTGTCGTTCTTCAAGACACAAGGATCACCAAGTCATTCAGATAAGGCGATCTTCGTATCACGATGTAGTGAGGGTGGGAGAAATTCATAAAGTGTTGGACATTAGTGGAGTGCAAACATATGTGATCAATAGTGCTAGAGTTTTATTTCTGAATGAGAGGCCTCAACCAAAATCTGGAAAATCAGTTGCTTACATTTGTGAGATTTGTGGAAGAAGCCTTTTAGACCCACTTCGTTTCTGTTCTTTGGGATGTAAGCTTGTAGGAATAAAGAGAAATGGGAATGCAAGCTTTGTTTTAGATGCTAATAACAATGAGGTATCAACAATTGAGGAGGGAATATCAAGGAGATTAATCTCTTCAAGACAACAACAAGAAGAAGTATTGCGTGAAGGCTCACAACAAGGCATGTATCCAGCCACGCCCCCAACACCTCCTTCAAATGCAAGGAGAAGAAAAGGAATTCCTCGTAGGGCTCCATTTGGATCCTAA 633 0.4076 MDTMLVPPWLKPLLNTPFFNVCRIHGDAARSECNMFCLDCNVDAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVGEIHKVLDISGVQTYVINSARVLFLNERPQPKSGKSVAYICEICGRSLLDPLRFCSLGCKLVGIKRNGNASFVLDANNNEVSTIEEGISRRLISSRQQQEEVLREGSQQGMYPATPPTPPSNARRRKGIPRRAPFGS 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01957 210 Pfam PLATZ transcription factor 63 134 IPR006734 -
Car04g01957 210 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 209 - -
Car04g01957 210 SUPERFAMILY B-box zinc-binding domain 19 64 - -
Car04g01957 210 MobiDBLite consensus disorder prediction 170 210 - -
Car04g01957 210 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 209 - -
Car04g01957 210 Gene3D Classic Zinc Finger 20 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01957 Car-Chr4 23202857 23204762 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Car04g01957 PLATZ 2.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01957 - - gmx:100809455 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02546 03 71368522 71370827 Car04g01957 04 23202857 23204762 PCT