Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01950 ATGCAACATTGTtcactctctccctctcatctttctctctctttcctctcCACAACACCATTCACACTCCCTCCAAAACCTTATCCAATTCACCGTTACTCCATAAaatcctcaatcaacaaaaaccaatcaacaaccacaaaacaaAGTTCATGGGTAAGCCCTGATTGGCTCACTTCATTATCCAAATCCCTAACCACACGAAAAGACGATGATTCTGGAATTCCATTAGCAAGTGCTAAACTCGATGATGTTTCTGATCTTTTGGGTGGTGCTCTTTTTCTCCCTTTGTTTAAATGGATGAATGAGTATGGTCCCATTTATCGTTTAGCTGCTGGTCCTAGAAACTTTGTGGTTGTTAGTGACCCTGCTATTGCTAAACACGTGCTTAAGAATTATGGCAAGTATGGTAAAGGTCTTGTTGCTGAGGTTTCTCAGTTTCTTTTTGGCTCTGGTTTCGCTATTGCTGAAGGTCCTCTTTGGACGGCAAGGCGCAGCAGGGCTGTGGTTCCATCTCTTCACAAACGGTACTTGTCTATTATGGTGGATAGGGTGTTTTGTAGATGTGCTGAGAGATTAGTAGAGAAGCTACAAGCTGATGCACTTAACGGAACTGCTGTTAACATGGAGGACAAGTTTTCTCAGTTGACCCTCGATGTTATTGGTTTATCTGTATTCAACTACAACTTTAATGCGTTGAATTCAGATAGTCCTGTTATTGAAGCTGTTTATACTGCACTGAAAGAGGCCGAGGCTTGCTCAACCGATCTTTTGCCGTATTGGAAGGTTAATTTTCTTTGTAAGATAATTCCAAGACAAATAAAGGCTGAAAAAGCTGTTACTGTTATCAGGAAAACTGTAGAAGATCTTATTGTAAAATGTAAAGAGATTGTAGAGTCTGAAGGTGAAAGAGTTGATGCCGATGAATATGTGAATGATGCTGATCCTAGGATTCTCCGATTTTGCTTGCCAGCAGGGAAGAGGTATGCAGTTTCTAGTGTGCAATTAAGGGATGATCTTTTATCAATGTTAGCTGCTGGTCATGAGACCACCGGTTCGGTGCTGACTTGGACACTTTATCTTCTAAGTAAGGATTCTTCCTCATTGGCAAATGCGCAACAAGAGGTTGACAAAGTTTTACAGGCAAGGCGTCCTGCCTATGAAGATATTAAAAATCTTAAGTTCTTGACGCGTTGTATTATCGAGTCGCTCCGGCTCTATCCACATCCGCCTGTATTGATAAAAAGAGCTCTAGTTCCTGATGAACTTCCGGGTGCTTACAAAGTCAATGCTGGTCAAGATATTATGATTTCTGTGTACAACATACATCGTTCTTCTGAGGTTTGGGATAGGGCTGAAGAGTTTTTGCCAGAAATATTTGATTTGGATGGTCCAGTGCCAAATGAAACAAATACGGATTTCAGATTCATTCCATTCAGTGGCGGGCCTCACAAGTGTGTCGGTGATCAATTTGCTTTATTGGAAGCCACAGTTGCTCTTGCAGTGTTTCTACAGAACATGAACTTTGAGCTGGTCCCTAATCAGAATATTAGCACGACAACTGGAGCAACAATACATACAACAAATGGCTTGTACATGAAATAG 1605 0.3925 MQHCSLSPSHLSLSFLSTTPFTLPPKPYPIHRYSIKSSINKNQSTTTKQSSWVSPDWLTSLSKSLTTRKDDDSGIPLASAKLDDVSDLLGGALFLPLFKWMNEYGPIYRLAAGPRNFVVVSDPAIAKHVLKNYGKYGKGLVAEVSQFLFGSGFAIAEGPLWTARRSRAVVPSLHKRYLSIMVDRVFCRCAERLVEKLQADALNGTAVNMEDKFSQLTLDVIGLSVFNYNFNALNSDSPVIEAVYTALKEAEACSTDLLPYWKVNFLCKIIPRQIKAEKAVTVIRKTVEDLIVKCKEIVESEGERVDADEYVNDADPRILRFCLPAGKRYAVSSVQLRDDLLSMLAAGHETTGSVLTWTLYLLSKDSSSLANAQQEVDKVLQARRPAYEDIKNLKFLTRCIIESLRLYPHPPVLIKRALVPDELPGAYKVNAGQDIMISVYNIHRSSEVWDRAEEFLPEIFDLDGPVPNETNTDFRFIPFSGGPHKCVGDQFALLEATVALAVFLQNMNFELVPNQNISTTTGATIHTTNGLYMK 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01950 534 PANTHER CYTOCHROME P450 FAMILY 4 113 534 - -
Car04g01950 534 PANTHER CAROTENE EPSILON-MONOOXYGENASE, CHLOROPLASTIC 113 534 - -
Car04g01950 534 PRINTS P450 superfamily signature 486 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01950 534 PRINTS P450 superfamily signature 346 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01950 534 PRINTS P450 superfamily signature 398 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01950 534 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01950 534 SUPERFAMILY Cytochrome P450 90 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01950 534 PRINTS E-class P450 group I signature 335 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01950 534 PRINTS E-class P450 group I signature 476 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01950 534 PRINTS E-class P450 group I signature 355 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01950 534 PRINTS E-class P450 group I signature 101 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01950 534 PRINTS E-class P450 group I signature 486 509 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01950 534 PRINTS E-class P450 group I signature 438 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01950 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 479 488 IPR017972 GO:0005506|GO:0016705
Car04g01950 534 Gene3D Cytochrome P450 78 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01950 534 Pfam Cytochrome P450 97 521 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01950 Car-Chr4 22865529 22870931 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01950 27 534 Cytochrome P450 AT3G53130 77.539 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01950 K09837 - gmx:100797221 862.833