Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01938 ATGGAACTTTCTCTTCTCAGCCATAAGCACCATCCTTTGCTCCTTCATTGCCCTCTCACCTCCAATCTCTTCACAAGGGCACACACAAAAATTGACCATAAAAGTACTTCAAATAGGTTATTACCATCACCATGCAGCTGTTCACATTCTTTCTCCAATAAAATTGCAGCAAAACCAGTCACCATGTCTTTACAAATTGAAGGAAGAAGAGCATTACTAAATTTTCTCCTCACAACATTTGGTGGAGTTTATGCATGTGATGTGGCTGAAGCTGTTAGCACTAGTAGAAGAGCTCTTAGAGGAGCCAAAATTCCTGAAAGTGATTACAAAACTTTGCCAAATGGTCTCAAGTACTATGATTTGAAGGTTGGGAATGGAGCTGAAGCTGTGAAAGGATCCCGAGTTGCAATTCACTATGTTGCTAAATGGAAAAGTATCACCTTTATGACTAGTAGACAAGGAATGGGCGTTGGAGGCGGAACGCCCTATGGATTTGATGTAGGCCAATCTGTGAGAGGAAATGTCCTAAAAGGTTTGGATTTAGGAGTCGAGGGCATGCGAGTAGGAGGCCAGCGGCTGTTAATTGTACCTCCTGAACTTGCCTATGGAAGCAAAGGAGTCCAAGAAATCCCTCCAAATGCAACAATAGAAGTGAGTTACTATGATCTCTTTGTTATGATTAGTTTCTTATTGttttttacataa 705 0.4085 MELSLLSHKHHPLLLHCPLTSNLFTRAHTKIDHKSTSNRLLPSPCSCSHSFSNKIAAKPVTMSLQIEGRRALLNFLLTTFGGVYACDVAEAVSTSRRALRGAKIPESDYKTLPNGLKYYDLKVGNGAEAVKGSRVAIHYVAKWKSITFMTSRQGMGVGGGTPYGFDVGQSVRGNVLKGLDLGVEGMRVGGQRLLIVPPELAYGSKGVQEIPPNATIEVSYYDLFVMISFLLFFT 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01938 234 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 27 219 - -
Car04g01938 234 Gene3D - 88 222 IPR046357 GO:0003755
Car04g01938 234 SUPERFAMILY FKBP-like 102 216 - -
Car04g01938 234 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 128 217 IPR001179 GO:0003755
Car04g01938 234 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 132 216 IPR001179 GO:0003755
Car04g01938 234 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC 27 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01938 Car-Chr4 22454407 22458136 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01938 132 217 Calmodulin-binding Proteins AT5G48570 40.909 9.46e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01938 - - gmx:100305843 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01938 04 22454407 22458136 Car04g01938 04 22454407 22458136 ECH