Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01926 ATGCAGCAGCAGCAGCAACGCCGAGGTGAGTTAGTAGTGAACGGTTACGTCGTTTACACACGACGAAAGAGGATCAATCATCATTCCGAGAACGAGGAATTCAAGAGACTCAAAACCGAAGAAAATGTACAAGTTAAAGTGGAAACTGTTTCTGCTGAGGCGGTCCGTAACGATGTCGTTTTGTGGACGTCTAAACGGCAACGGAAACCGTCGTATAAGATGAAAGTTGAATCAGAACAAGATGCTTCTGCTGTTAACGTCGCTGTTCGCGTTGCGAAGGAGAATACGAATACGAAGAGCATTGTGGTGAACAAGAAGCCTATGACTGTGAAGGAGCTATTCGATACTGGTTTGCTCGATGGTGTTCCCGTTGTTTACGTCGGCTGCAAAAAGCAGGCTTCAGATTCGGGATTGCAGGGTGTAATTGCAGGTGGAGGGATATTGTGCTCGTGCTGTCTGTGCAATGGACGCAAAATTATTCCCCCCTCACAATTTGAGATTCATGCCTGCAAAATATATAAGAGGGCAACCCAATATATCTGCTTTGAAAATGGGAAGAGTTTGCTTGAACTATTGGGAGTATGCAGGGCAGCTCCCTTACATACTTTAGAAGCTACCGTTCAAAATTTTATCTGTTTGCCGTCTGAAGAAAAGTATTTTACTTGCAGGAGCTGCAGAGGTTGTTTCCCTACTTCAACTGTGGAGAGAGTGGGACTTACGTGCCATTCTTGCATTGAGGCAAGGAAGTCTGAAGATAATTCTATTCGTGCAGTTGGCAAAAGAGTCAGGACTCCTCGACCATTACTGTTCTCTAGTCCATCTAGTACATCGAAAATGTGTATCTCCTCAAAAACTAAGAGTAAGAGACAAAAGAAGAAGAGAACAAAGCCATCAAAACTGTCAGTAAAACTTAAGACTGCTCCAATTACTTCAATTTCGACGTGCTCATCTCCACAAAATAAGTGTCACTGGAGGATCAATAACAAGCATCAGCGATTGCACAAATTAATTTTTGAAGAAGATGGATTGCCTGATGGAGCTGAAGTAGCTTATTATGCACGTGGACAGAAATTGCTTGAAGGTATTAAAAAGCGATCCGGAATTATTTGTCGATGCTGCAACACTGAGATCAGCCCCTTACAATTTGAGATTCATGCAGGGTGGGCTTCTCGCAGGAAGCCTTATGCATACATCTATACGTCGAATGGGGTATCTCTCCATGAGTTGGCATTATTCCTCTCAAAAGATCGCAAGCGAACTGCAAAATATAATGATGATGCATGCATTGTTTGTTGGGATGGTGGAAACCTGTTGCTCTGTGATGGATGCCCAAGGGCCTTTCATAAAGAATGTGCATCTGTATCAAGTACTCCACTAGGTGGATGGTACTGTCCAATTTGTCAACACATGTTCCTTGGAGAAGGGTCTGTGGCACTCAATCCTGATGCTGTGGCAGCCGGAAGGGTTGAAGGAGTTGATCCTATTGAACAGATTGCCAAGAGGTGCATACGCATTGTGAAAGACATTGAAGTTGAGATAGGTGGATGCGCTTTGTGCAGGGGTTCTGACTTCAGCAGATCAGGATTTGGTCCACGCACAATAATAATATGTGATCAGTGTGAAAAGGAATATCACGTGGGCTGTTTGAGGGATCATAAAATGGCATATTTGAAGGAGTTGCCCGAAGGGGACTGGCTTTGTTGCAATGATTGCATAAGAATACATTCTATTTTGGAGAACCTCCTAGTTAGGGTGGCAGAGAGACTCCCTGAATCTCTTTTGGATGTTATAAAGAAAAAGCAAGAGGAAAGATGTTTGGAACCCCTTAATGTGATTGATATAAGATGGAGACTTGTTAATGGCAAAGTTGCTTCTCCTGAAACCAGGCCATTGCTTTTGGAGGCCGTGACCATATTTAATGAATGCTTTGATCCTATAGTTGATGCAGCTACTGGACGTGACCTTATTCCTGCCATGGTTTATGGAAGGAATTTGCAAACTCAGGATTTTGGAGGAATGTATTGTGCATTATTAATGGTCAATTCATCTGTGGTATCTGCGGGCATGCTTCGGATTTTTGGGAGAGATATTGCAGAACTCCCATTAATTGCTACAAAACTCAAGAACCGTGGAAAGGGCTACTTCCAAACACTGTTCTCGTGCATAGAGAGGCTGCTAGCCTTCTTGAATGTGAAGTACCTTGTGCTACCAGCTGCTGAAGAAGCAGAATCCATATGGATACACAAATTTGGGTTTAGCAGGATAAAACCTGAGCAGCTCGCCAACTATAGAAATAATTGCCAACAGATGATGGCATTCAAAGGGACAGTTATGCTTCATAAAACGGTGCCTCGATGTCGGGTCATAAGTAATCAATCATGA 2382 0.432 MQQQQQRRGELVVNGYVVYTRRKRINHHSENEEFKRLKTEENVQVKVETVSAEAVRNDVVLWTSKRQRKPSYKMKVESEQDASAVNVAVRVAKENTNTKSIVVNKKPMTVKELFDTGLLDGVPVVYVGCKKQASDSGLQGVIAGGGILCSCCLCNGRKIIPPSQFEIHACKIYKRATQYICFENGKSLLELLGVCRAAPLHTLEATVQNFICLPSEEKYFTCRSCRGCFPTSTVERVGLTCHSCIEARKSEDNSIRAVGKRVRTPRPLLFSSPSSTSKMCISSKTKSKRQKKKRTKPSKLSVKLKTAPITSISTCSSPQNKCHWRINNKHQRLHKLIFEEDGLPDGAEVAYYARGQKLLEGIKKRSGIICRCCNTEISPLQFEIHAGWASRRKPYAYIYTSNGVSLHELALFLSKDRKRTAKYNDDACIVCWDGGNLLLCDGCPRAFHKECASVSSTPLGGWYCPICQHMFLGEGSVALNPDAVAAGRVEGVDPIEQIAKRCIRIVKDIEVEIGGCALCRGSDFSRSGFGPRTIIICDQCEKEYHVGCLRDHKMAYLKELPEGDWLCCNDCIRIHSILENLLVRVAERLPESLLDVIKKKQEERCLEPLNVIDIRWRLVNGKVASPETRPLLLEAVTIFNECFDPIVDAATGRDLIPAMVYGRNLQTQDFGGMYCALLMVNSSVVSAGMLRIFGRDIAELPLIATKLKNRGKGYFQTLFSCIERLLAFLNVKYLVLPAAEEAESIWIHKFGFSRIKPEQLANYRNNCQQMMAFKGTVMLHKTVPRCRVISNQS 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01926 793 SUPERFAMILY FYVE/PHD zinc finger 415 470 IPR011011 -
Car04g01926 793 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 666 758 IPR016181 -
Car04g01926 793 ProSitePatterns Zinc finger PHD-type signature. 428 467 IPR019786 -
Car04g01926 793 ProSiteProfiles Zinc finger PHD-type profile. 425 470 IPR019787 -
Car04g01926 793 MobiDBLite consensus disorder prediction 271 300 - -
Car04g01926 793 PANTHER AUTOIMMUNE REGULATOR 26 789 - -
Car04g01926 793 Pfam Tify domain binding domain 363 410 IPR032308 -
Car04g01926 793 Pfam Tify domain binding domain 140 192 IPR032308 -
Car04g01926 793 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 514 574 IPR013083 -
Car04g01926 793 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 26 789 - -
Car04g01926 793 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 413 497 IPR013083 -
Car04g01926 793 SMART PHD_3 427 468 IPR001965 -
Car04g01926 793 SMART PHD_3 515 572 IPR001965 -
Car04g01926 793 SUPERFAMILY FYVE/PHD zinc finger 507 569 IPR011011 -
Car04g01926 793 MobiDBLite consensus disorder prediction 284 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01926 Car-Chr4 22190348 22201452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01926 99 789 PHD Transcription Factor Family AT2G36720 50.612 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01926 - - gmx:100798276 1166.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02543 03 71327804 71338999 Car04g01926 04 22190348 22201452 PCT