Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01924 ATGAAGCGATACCACAACTTATCTTTTGTCTTGATTGAAGAAGAACAAACAAAGCCTCAAGTTCTTGATAACTATTACTTTCCGAAAGAAGGCTTCTCATATCAGGATCTTTTGGAAGCCACTAGAAATTTCTCAGAATCTGAAGTTATAGGAAGAGTAGCTTGTGGAACTATCTACAAATTTTTTATGAATGATGGTGAATTTATTGTTGTCAAGAAGCTGAATTTGCGCGGAGAAGGAGTGTCGGGCATCAACCGAAGCTTCTTGGATGAGATTTCAACTCTTGAAAAGACCAGCCACATGAACATTGTGAAGCTGCATGAATTATGTTTTCATGAAGATTCTAATCTTTTATTGTATGAGTACATGGAAAATGGAAGCCTTGGTAAAAAGCTTCGTTCAAGTTCAACATTTTTATTATTGGATTGGAATGTTCGATATGAAACAACTTTAGGGATCTAA 462 0.355 MKRYHNLSFVLIEEEQTKPQVLDNYYFPKEGFSYQDLLEATRNFSESEVIGRVACGTIYKFFMNDGEFIVVKKLNLRGEGVSGINRSFLDEISTLEKTSHMNIVKLHELCFHEDSNLLLYEYMENGSLGKKLRSSSTFLLLDWNVRYETTLGI 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01924 153 Gene3D Phosphorylase Kinase; domain 1 7 122 - -
Car04g01924 153 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 152 - -
Car04g01924 153 Pfam Protein kinase domain 45 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01924 153 SUPERFAMILY Protein kinase-like (PK-like) 20 152 IPR011009 -
Car04g01924 153 ProSiteProfiles Protein kinase domain profile. 44 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01924 153 PANTHER OS07G0152200 PROTEIN 6 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01924 Car-Chr4 21729895 21730356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01924 32 153 Receptor kinase-like Gene Family AT1G56120 39.200 5.86e-21 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car04g01924 Pkinase 4.6e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01924 - - gmx:100818311 200.675