Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01919 ATGTTTAGGTGGAAGAATTTGATGTTGACAGGGACACCACTTCTAAATAATTTACATGAGTTATGGTCTATGTTGGAGTTTATGATGCCTGATATTTGTGCTTCTGAAGATGTCAACTTAAAAAAGTTACTTAGTGCAGAAGATAGGGATTTAATTAGTCATATGAAGTCTATATTAGTACCATTTATTTTGCGGCGTCTGAAATCTGATGTTGAATATGTCATAATGGAAAAACAACAGGATCATGCTTACAAGGAAGCCATTGAGGAGTATCGTACAATTTCACAAGCTCGGTTAACAAAGTGTTCTGATCGGAACTCAAATAAATAA 330 0.3424 MFRWKNLMLTGTPLLNNLHELWSMLEFMMPDICASEDVNLKKLLSAEDRDLISHMKSILVPFILRRLKSDVEYVIMEKQQDHAYKEAIEEYRTISQARLTKCSDRNSNK 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01919 109 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A CONTAINING DEAD/H BOX 1 7 95 - -
Car04g01919 109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 73 IPR027417 -
Car04g01919 109 Pfam SNF2-related domain 6 80 IPR000330 GO:0005524|GO:0140658
Car04g01919 109 Gene3D - 3 92 IPR038718 -
Car04g01919 109 PANTHER SNF2/RAD54 HELICASE FAMILY 7 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01919 Car-Chr4 21295203 21295925 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Car04g01919 SNF2_N 7e-12 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01919 K14439 - gmx:100806323 164.081