Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01914 ATGGCGGTTCCGGGGAGACGCAATGGCCTTAACGAGGACGGTGATGAAGAATCCAACGGCCTTTTCGAAGAAGAAGGTCTCGTTGATTTCCAAGAAGACACTCTAACTCCTCCTCATCTTCGTGACCTCTCCCGTGCCGCTCAGTTTGGCGACCTCCCTTCCCTCCGCCTCGCTCTCGATAACTTGACTGGCAGTATTGATGAACCAGTGGAGGATGGGGATACGGCTCTTCATTTGACATGTTTATATGGCCATTTTGAATGTGCCCAGCTGCTACTAGAAAGAGGAGCTAATTTGGAGGCTAATGACGAAGATGGCGCAATTCCTTTACATGATGCTTGTGCAGGAGGATTTGTGGAGATAGTCCAACTTCTACTCAACAGAGCTAATGGCACTGAGCATATAAAAAGGATGCTAGATGCGGTTGATTCTGAGGGTGATACTCCTCTTCATCATGCTGCAAGAGGTGAGCATGCTGATGTAATTAGGTTGTTGCTGTCTAATGGTGCGTCATCCACAAAGGCAAACTTATATGGAAAGACCCCTGCAGAGTTACCTGAACACGGCACAGAGGCTAGGAGGCTCCTTGAAGCTGCTGCTACTGCCATGGCAATTTAA 618 0.4854 MAVPGRRNGLNEDGDEESNGLFEEEGLVDFQEDTLTPPHLRDLSRAAQFGDLPSLRLALDNLTGSIDEPVEDGDTALHLTCLYGHFECAQLLLERGANLEANDEDGAIPLHDACAGGFVEIVQLLLNRANGTEHIKRMLDAVDSEGDTPLHHAARGEHADVIRLLLSNGASSTKANLYGKTPAELPEHGTEARRLLEAAATAMAI 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01914 205 ProSiteProfiles Ankyrin repeat profile. 145 177 IPR002110 GO:0005515
Car04g01914 205 SUPERFAMILY Ankyrin repeat 43 184 IPR036770 -
Car04g01914 205 Pfam Ankyrin repeat 146 171 IPR002110 GO:0005515
Car04g01914 205 PANTHER TANKYRASE-LIKE 1 201 - -
Car04g01914 205 ProSiteProfiles Ankyrin repeat profile. 72 104 IPR002110 GO:0005515
Car04g01914 205 Gene3D - 37 204 IPR036770 -
Car04g01914 205 ProSiteProfiles Ankyrin repeat region circular profile. 105 128 - -
Car04g01914 205 ProSiteProfiles Ankyrin repeat region circular profile. 145 171 - -
Car04g01914 205 PANTHER SOWAH (DROSOPHILA) HOMOLOG 1 201 - -
Car04g01914 205 Pfam Ankyrin repeats (3 copies) 43 129 IPR002110 GO:0005515
Car04g01914 205 ProSiteProfiles Ankyrin repeat profile. 105 137 IPR002110 GO:0005515
Car04g01914 205 ProSiteProfiles Ankyrin repeat region circular profile. 72 104 - -
Car04g01914 205 SMART ANK_2a 105 134 IPR002110 GO:0005515
Car04g01914 205 SMART ANK_2a 145 174 IPR002110 GO:0005515
Car04g01914 205 SMART ANK_2a 72 101 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01914 65 196 Ion Channels AT2G25600 32.484 2.95e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01914 - - gmx:100527544 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01914 04 21028528 21030558 Car04g01914 04 21028528 21030558 ECH