Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01894 aTGGCGAACAAAAACTCCTTATTCGACCTCAAAACGATGACGTATTCCTcacccagaccacccatccaccttcccaccgacccCAACCTCTCCCTAACCACATTCCTCTTCCAATCCACTTCTTCCGCCGCCGATTCTATCGCCCTCGCCGACGCCCACTCCAACGACTCCCTAACCTTCCACCAACTCAAAACCCAAGTCATCGCCCTCTCCCACTCCCTCCTCCGCCTCGGAATCAAACGAGGCGACATTGTTTTGCTATTCGCACCTAACTCCATACGCTTCCCGGTTTGCTTCCTCGCTGTTGTTGCAATAGGTGCTATTGCCACCACCTGTAGCCCCTTATACACCCCCTCCGAACTCTCCAAGCAAATCAATGACTCCAAACCGAAACTCGTTATCACCGTATCAGAACTATATCAAAAAATCAAAGCGTTGAAATTAGATTTACCTTCCATATTGCTTGAAGATCCTTCTAGCAGCGTAATTTCGTCGAACAAGTTCGGTTCTAAGGTTTTATACTACGATAATTTGATTGAAGAATCGATCGAGAGCTCCGGCGAGATTCCAGCGACCGGAGCTGTTTTGCAATCTGACGTGGCGGCGCTACTGTACTCTTCAGGAACCACGGGGAGAAGTAAGGGAGTGATGTTGACTCACCGGAACTTCATAGCGGTGGCGGTTGCGGGCTCGGCGGATCAGGATCGGTACGGTGATGGGAAGAACGTGTTCCTGTGTTTGGTGCCGATGCATCATGTGATGGGATTGGCAGTGATAACGTATACGCAGCTGCGAAGAGGGAACACGGTGGTGTCGATGGGAAGATTTGAATTGGAGAAGGCATTGGCGGCGGTGGAGAAGTTTAGAGTGACGCATTTGTACGTTGCTCCGCCGGTGATGGTGGAGCTGAACAAACGACGTCAGGTTTTGAGCGGTTATGACTTGTCGTCGCTGAAGCAACTTGCCGGCGGTGCTGCTCCTTTGGGAAAAGATGTGATGCAGGAGTGTGCTAAGATTCTTCCCCAAGTTGAAATCATTCAGGGGTATGGCATGACTGAAGCAAGTGGACTTATTTCCGTAGAAAATCCAAAGGAAAGTTGCTTCATTGCAGTTTCAGGTTCAACTGGAACACTAATTCCATGTATAGAATCCCAAATAGTTAGTTTGGAAACATCTAAGCCCCTTCCACCGAATCAATTAGGTGAAATTTGGTTACGAGGACCTACTATAATGAAAGGATACTTTAACAATCCAGAAGCAACAAAACTGACAATTGACGATAAGGGTTGGATGCTTACTGGAGATCTTGGATATTTTGATGAAAAGGGACAGCTATTTGTTGTGGATCGAATAAAAGAGCTCATCAAATGTAGCGGCTATCAAGTGGCACCAGCTGAACTTGAAGATTTACTGGTTTCTCACCCTGAAATTTCTGATGCTGGCGTGATCCCATCTCCTGATGCGAAAGCCGGTGAGGTTCCGGTTGCTTTTGTTGTTCGCTCACCCGATAGCTCGATAACTGAAGAAGAAATTCAGAAATTTGTAGCAAAACAGGTTGCACCATACAAAAGGTTGCGGCGAGTGAGTTTTATAGACAAGATTCCAAAGTCACCCACAGGAAAGATCTTGAGAAAGGATCTCATAATTTTTGATCGACAAAAGACATCAAAGTTATAG 1677 0.4556 MANKNSLFDLKTMTYSSPRPPIHLPTDPNLSLTTFLFQSTSSAADSIALADAHSNDSLTFHQLKTQVIALSHSLLRLGIKRGDIVLLFAPNSIRFPVCFLAVVAIGAIATTCSPLYTPSELSKQINDSKPKLVITVSELYQKIKALKLDLPSILLEDPSSSVISSNKFGSKVLYYDNLIEESIESSGEIPATGAVLQSDVAALLYSSGTTGRSKGVMLTHRNFIAVAVAGSADQDRYGDGKNVFLCLVPMHHVMGLAVITYTQLRRGNTVVSMGRFELEKALAAVEKFRVTHLYVAPPVMVELNKRRQVLSGYDLSSLKQLAGGAAPLGKDVMQECAKILPQVEIIQGYGMTEASGLISVENPKESCFIAVSGSTGTLIPCIESQIVSLETSKPLPPNQLGEIWLRGPTIMKGYFNNPEATKLTIDDKGWMLTGDLGYFDEKGQLFVVDRIKELIKCSGYQVAPAELEDLLVSHPEISDAGVIPSPDAKAGEVPVAFVVRSPDSSITEEEIQKFVAKQVAPYKRLRRVSFIDKIPKSPTGKILRKDLIIFDRQKTSKL 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01894 558 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 553 - -
Car04g01894 558 Gene3D - 13 452 IPR042099 -
Car04g01894 558 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 7 553 - -
Car04g01894 558 SUPERFAMILY Acetyl-CoA synthetase-like 24 548 - -
Car04g01894 558 CDD 4CL 24 547 - -
Car04g01894 558 Pfam AMP-binding enzyme C-terminal domain 466 541 IPR025110 -
Car04g01894 558 Gene3D - 453 553 IPR045851 -
Car04g01894 558 ProSitePatterns Putative AMP-binding domain signature. 203 214 IPR020845 -
Car04g01894 558 Pfam AMP-binding enzyme 42 457 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01894 Car-Chr4 20642405 20645538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01894 15 554 Monolignol Biosynthesis Gene Families AT4G05160 59.815 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01894 K01904 - qsu:112025709 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01894 04 20642405 20645538 Car04g00880 04 8621065 8623981 ECH
Car04g01894 04 20642405 20645538 Car04g01894 04 20642405 20645538 ECH