Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01887 ATGCTTAGTTTTTTTATTGGAAAGATACAAAAGAGTTTATTATTCTTTGTACCAAGAAAGCATGCATTGAGCTATTTGAATGAAAATTGTAGCACAAGTGAGGTGGCTGATGATGTTATGAAAGGTTACTTTGCTGTTCTTGCAATGAAAGGTGAGGAAACTAGAAGGTTTATTGTTGGTTTAGATTATTTGACTGATCCTGCTTTTTTGGGATTGCTTGATGATGCTTCCGAGGAGTATGGTTTTAGACAAAAGGGAACCCTTGTTGTTCCTTGTAGACCTATAGATTTGCAGAACATTCTAGATGGTGGAAAACAATAA 321 0.352 MLSFFIGKIQKSLLFFVPRKHALSYLNENCSTSEVADDVMKGYFAVLAMKGEETRRFIVGLDYLTDPAFLGLLDDASEEYGFRQKGTLVVPCRPIDLQNILDGGKQ 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01887 106 Pfam Auxin responsive protein 27 101 IPR003676 GO:0009733
Car04g01887 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 105 IPR003676 GO:0009733
Car04g01887 106 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01887 Car-Chr4 20434386 20435205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01887 28 92 Calmodulin-binding Proteins AT5G20810 46.154 7.78e-13 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01887 - K14488 gmx:100818734 137.502