Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01886 ATGGTTCGGTCTTTTGTTTGGAAGATACAAAAGGGTATTTCACACTTAGTAAACAAAAGGCACGAAGATTTCAGTGACGAGATAATAGTGGCAGAGCCAGAGGATGTTAGGGAGGGATATTTTGTTGTTGTTGCAAACAAGGAGGGAGAAACTAAAAGGTTTGTGATTGGGTTAGAGTTCCTGAGTGATCCTGCATTTTTGGGATTACTCGATCAAGCTCGGGAAGAGTATGGTTTCATATACAAAGGAGCTATTGCTGTCCCCTGTCGACCTCAAGAATTACATGACATTCTGGATGGTCGCTGA 306 0.4216 MVRSFVWKIQKGISHLVNKRHEDFSDEIIVAEPEDVREGYFVVVANKEGETKRFVIGLEFLSDPAFLGLLDQAREEYGFIYKGAIAVPCRPQELHDILDGR 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01886 101 PANTHER SMALL AUXIN-UP RNA-RELATED 1 100 - -
Car04g01886 101 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 100 IPR003676 GO:0009733
Car04g01886 101 Pfam Auxin responsive protein 28 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01886 Car-Chr4 20405055 20405791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01886 13 89 Calmodulin-binding Proteins AT3G43120 41.176 4.35e-12 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01886 - K14488 mtr:MTR_1g063330 148.288