Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01879 ATGACTTCAGAACTAGTTATCCACACATTCTCTCAACCACAAACTAATAAACCCTCTACCGCCACCGCTTCCGATCCCAATTCACAAATTTCAACCGTCAAAAGAACTTCCACCACCACCGCCTCTCGATCCACcaaagaccgtcacaccaaagttaacggccgcggtcgtcgtgttcgtatgccgcctctctgcgccgccagaatattccagcttacgcgtgaactcggccaccgttccgacggcgagactatcgagtggcttcttagacatgctgagccgtctattatcgctgccaccgggactggaactgtcccCGCCGCTCCAGTCTCCACCGTGTCACCCGTCTCATCCTCGTCGGTTCCCTCCGTTTCTTGCCATGTCCAGCCTGTTTCGTCGGTTGGTCCAGGCGGTCAGGGAATGTTTGCTGCGGCTATGTCGCAACCACAGCCGAGCTGTCGTCTTGACCTATGTCAGCCGCCGGGAATGGAGTATGCTGCGGCGAATGGTTACCGTCACATGCCGTTTACGGCGTTGTTGTTGCAACCGACGACGGCGGAGGAGAATCAGCAGGGAGAAGCTCTGAGCGAACANNNNNNNNNNGGAAGAAGCTCTGAGCGAACAATGACATTGTTACGGTTCTGTATATTTGTTGAATAG 660 0.3758 MTSELVIHTFSQPQTNKPSTATASDPNSQISTVKRTSTTTASRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGTGTVPAAPVSTVSPVSSSSVPSVSCHVQPVSSVGPGGQGMFAAAMSQPQPSCRLDLCQPPGMEYAAANGYRHMPFTALLLQPTTAEENQQGEALSEXXXXGRSSERTMTLLRFCIFVE 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01879 219 MobiDBLite consensus disorder prediction 1 40 - -
Car04g01879 219 MobiDBLite consensus disorder prediction 1 56 - -
Car04g01879 219 Pfam TCP family transcription factor 44 143 IPR017887 -
Car04g01879 219 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 25 132 IPR005333 GO:0003700
Car04g01879 219 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 25 132 - -
Car04g01879 219 ProSiteProfiles TCP domain profile. 45 99 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01879 Car-Chr4 20334919 20335995 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01879 45 185 TCP Transcription Factor Family AT2G37000 57.042 1.15e-44 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Car04g01879 TCP 4.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01879 - - cam:101510590 325.094