Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01877 ATGAAGTGTTTTCCATTCTTAATTTACTATGGAGAAAAAAAGGGTGATGCTAAGAGCTTGCGATCACTATCGGGTCTGTCGAACAATTCTACTTACGGTGGGAGTGACGTGCGGAGAACTGGTTCTGAATTGAATTCTCTAGACGCCTCAGACAATAGCACAGACTCCCTTAGGAGGAATGCATTTCCCAATTTGTCCCAAAGACCAAGCAGCCTCAGAGTATTTACCGTATCCGAACTGAAATCAGCCACCAAGAATTTTGGTCGCTCTGTTATGCTTGGAGAAGGTGGATTCGGGTGTGTCTACAAGGGATTGATCAAGAGTGTAGATGATCCACCTAGAAAAATTGAAGTTGCAGTAAAACAACTCGGTAAAAGAGGAATTCAGGGGCATAAGGAATGGGTAACTGAAGTGAATGTTCTGGGTATTGTTGAGCATCATAATCTTGTGAAACTAGTGGGCTATTGTGCTGACGATGATGAAAGAGGAATCCAGCGGCTTTTGATTTATGAATATATGCCGAATGGAAGTGTGGAACACCATTTATCCTCGCGATCAGAAACTCCTCTCCCGTGGAGTAGGAGACTGAAAATAGCTCAAGATGCTGCTCGTGGATTAACGTACCTGCACGAGGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCGTCAAATATCCTTCTGGACGAGCATTGGAATGCAAAGCTGTCTGACTTCGGATTAGCAAGATTGGGACCATCTGATGGGTTAACTCATGTCTCAACTGCGGTTGTAGGAACAATGGGATATGCAGCTCCTGAATATATTCAAACTGGACGTCTCACTTCAAAGAGTGATGTATGGGGCTACGGTGTCTTCCTTTACGAACTCATTACCGGAAGACGCCCTTTAGATCGAAATCGCCCCAAGGGCGAGCAAAAGCTCTTGGAATGGATAAGACCTTATCTTTCAGATGGGAAGAAATTTCAAATAATATTGGATCCAAGACTTGAGAGGAAACACCTCCTCAAGTCGGCCCAAAAACTTGCCATGATAGCTAACAGATGCTTGGTCCGAAACCCAAAGAATCGCCCGAAGATGAGTGAAGTATTAGAAATGGTGGATAGGATTGTCGAGTCTTCGGTGAGTGCTAATCAACAGCCGCCCTTGAATAGTGTAGCCTCGGCAGATGATTCTCAGGACGCTGAAATAAAGAACAAGAAGAGAATTATGGATCCAAAACCAGAGTCAGATTGGAATTGGTTTAGGATGTGGAGACCAAAGCTTTTAAGAACAAGTTGA 1284 0.4338 MKCFPFLIYYGEKKGDAKSLRSLSGLSNNSTYGGSDVRRTGSELNSLDASDNSTDSLRRNAFPNLSQRPSSLRVFTVSELKSATKNFGRSVMLGEGGFGCVYKGLIKSVDDPPRKIEVAVKQLGKRGIQGHKEWVTEVNVLGIVEHHNLVKLVGYCADDDERGIQRLLIYEYMPNGSVEHHLSSRSETPLPWSRRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDEHWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYIQTGRLTSKSDVWGYGVFLYELITGRRPLDRNRPKGEQKLLEWIRPYLSDGKKFQIILDPRLERKHLLKSAQKLAMIANRCLVRNPKNRPKMSEVLEMVDRIVESSVSANQQPPLNSVASADDSQDAEIKNKKRIMDPKPESDWNWFRMWRPKLLRTS 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01877 427 PANTHER OS01G0588500 PROTEIN-RELATED 14 421 - -
Car04g01877 427 ProSitePatterns Protein kinases ATP-binding region signature. 93 121 IPR017441 GO:0005524
Car04g01877 427 MobiDBLite consensus disorder prediction 376 404 - -
Car04g01877 427 MobiDBLite consensus disorder prediction 31 59 - -
Car04g01877 427 SUPERFAMILY Protein kinase-like (PK-like) 64 368 IPR011009 -
Car04g01877 427 Pfam Protein tyrosine and serine/threonine kinase 92 366 IPR001245 GO:0004672|GO:0006468
Car04g01877 427 Gene3D Transferase(Phosphotransferase) domain 1 173 395 - -
Car04g01877 427 MobiDBLite consensus disorder prediction 376 393 - -
Car04g01877 427 PANTHER KINASE 1B 14 421 - -
Car04g01877 427 ProSiteProfiles Protein kinase domain profile. 87 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01877 427 CDD STKc_IRAK 93 371 - -
Car04g01877 427 Gene3D Phosphorylase Kinase; domain 1 67 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01877 Car-Chr4 20308347 20312771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01877 1 365 Glycoside Hydrolase AT3G07070 43.052 4.33e-92 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car04g01877 PK_Tyr_Ser-Thr 5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01877 - - gmx:100305438 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01877 04 20308347 20312771 Car04g01877 04 20308347 20312771 ECH