Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car04g01876 | ATGAGGAACTATGTTCCCTACATTCTCCTCTTTTTCTTCTCTTTCACTCTCTTATTACCAAATATTCAATGTGCCGATGGCACTTTTGCCCCTTCCTTTTATACCGAAGAAATCTACAAAGAACTTCAGAATATCGCTCTCCTTTTAAATAAGGACATTAAATCAAGTTTAGGTTTCTGCATTAAGGATCCGAAAAATGATTGGGAGGAAGCTTTTGATTTTACAGGAAAGTTGGATTTTGTTGATTCTTGTGTTAAGAAAAAAGGAGATTTCAGGGATCGTATATGTACTGCAGCTGAAATAAGGTACTACTTCCATGGTTTCTTGGCTCAGGGAGCATCAGCTGACAATTATGTAAAACCGAACAAGAATTGCAATTTGACCTCATGGGTTTCTGGTTGTGAACCTGGATGGGGTTGTAGTACGGGCAAGGATATTGACCTTAAAAAGGACATCAAGGAAATTCCTCAGAGAACCAAAAACTGTCAACCTTGTTGCGAGGGTTTTTTCTGTCCTCAAGGGTTGACTTGTATGATACCTTGCCCACTAGGTTCTTACTGTCCACTTGCAAAACTGAACAACAAGACTGGCGTGTGTGATCCATATAGTTACCAGATACCTCAGGGAGAAATGGATCATACTTGTGGTAGTGCCGATATTTGGTCTGGTGTGGTGAACAATAGTGATATATTCTGTTCTCCCGGATCATACTGCCCAACTACAACACGTAGAGTTTCTTGCGATAGTGGATATTACTGCAGGATGGGTTCTACTCATCAGATGGCATGCTCCAAGTTCAGTACATGTAATCCAAACACAGCAACTCAAAATATGCATGCTTATGGGGCACTTCTTATTGTTGCATTGAGTACTGTCCTGATCTTCATTTATAACTGTTCTGATCAAGTTCTAGCTACACGAGAAAGAAGGAAAGCTAAATCCAGGGAAGCTGCAGCAAGGCAGGTAAGAGAAACTGTACAAGCTCGAGAAAGGTGGAAAATAGCAAAAGATGCTGCTATAAGGAATAAGATGGGAATGCAAGATCAGCTATCCCGCACTTTTTCTCGCAGAAAATCAGTTAAGCAAGGGGAGCAAACAAAGGTTTTCAGTCAAGCTAACCCTGATACGGGAAATTCGCTTTTGCAACCGCCACCAGTACCTCCAGCGCAGTCATCTGCAGCCACAAAAGGGCAAAAGGAACCTAGCAACCTTACTAAAATGATGAATTCACTTGAGAATGACCCTCATAGTAATGAAGGATTCAATCTACAGATTGGGGACAAAAATATTAAAAAGCAGATGCCAAAGGGACGGCAGTTACATACACAAAGCCAAATTTTAAGGTATGCATATGGTCAGATTGAGAAGGAGAAGGCTCAACAAGAGAAAAACAATAACTTAACCTTCTCAGGAATAATTTCAATGGCCCAGGAAGGTGAGGAGGTTGTAACGAGGCCTGTGATCGAAGTAGCTTTCAAAGATTTAACCCTTACTTTGAAAGGGAAAAGGAAACATCTACTAAGGTGTGTGACAGGTAAAATCATGCCTAGTCGAGTTTCAGCTGTGATGGGTCCCTCAGGAGCTGGCAAAACTACATTTCTTTCTGCTCTGGCAGGGAAAACAAGAGGATGCACTATGACAGGCTCAATTCTAATCAATGGAAAACCTGAATCCATTCACTGTTATCAGAAAATTATTGGATATGTGCCACAAGATGATATTGTGCATGGGAATTTGACTGTGGAGGAAAATCTTCGTTTCAGTGCGAGATGCAGACTATCTGCTGATCTGCCAAAACATGATAAGGTTCTGATTGTTGAAAGAGTAATTGAAACCTTGGGGCTCCAGGCAGTAAGGGATTCCCTTGTTGGAACAGTGGAGATGCGAGGCATATCTGGTGGGCAAAAAAAACGTGTAAATGTAGGGTTGGAGATGGTTATGGAGCCTTCATTGTTAATCTTAGATGAGCCCACAACTGGTCTGGACAGTGCATCTTCCACTTTACTTCTGAAAGCACTTCGTCGTGAAGCTCTTGAAGGGGTAAACATCTGCATGGTACTTCACCAGCCAAGCTATACTTTGTTCAGAATGTTTGATGATATAATATTTCTAGCAAAAGGTGGCCTTACGGCATATCACGGCCCTGTTAAAAAAGTAGAAGAATACTTTGCTGGCATTGGAATCACTGTACCTGATCGTGTGAATCCTCCAGACCATTTTATTGACATTCTAGAAGGTTTAGTGAAACCAAGTACAGGTGTGACTTATCAACAACTACCTGTCAGATGGATGCTTCATAATGGTTACCCAGTACCACCTGATATGCTTCATTATGCTGATGAAATTTCTGCTTCATCATCTTCCTCAAATCCAAATCTTGCGATAAAGGGTGCCGATGAAGCTTCTGATAAATCATTTGCCGGAGAGTTTTGGGAGGATATGAAAAACAATGTTCAGATGCGAAAAGATCATATAGAGGCAACCTTCTTAAAGACTAAAGACTTATCTGACCGAAGAACTCCTGGTGTTGCTCGGCAATATAGATACTACCTTGGGCGGATAGGTAAGCAGCAGCTGCGAGAAGCAAAATCACAAGCGGTTGATTATCTCCTTTTATTAGTTGCTGGTGCTATCTTGGGAACTCTTACTAAAGTAAATGATGAAACATTTGGGTCTCTTGGATATACATATACTGTCATCGCTGTTTCTCTACTTTGCAAGATTGCAGCTCTGAGATCATTTTCTATGGATAAATTACAATACTGGAGGGAGAGTGCATCAGGGATCAGCAATCTAGCTCATTTTTTGTCCAAAGATACAATTGATCTTTTCAGTACAATTGTGAAACCTCTCATTTATCTGTCCATGTTCTATTTTTTTAGCAATCCAAGGTCAAGCTTCGGAAGTAATTATGCAGTTTTGGTATGCCTTGTGTACTGTGTGACTGGCATGGCTTACGCATTAGCAATTTATTTTGAACCTGCTCCTGCTCAGCTGTGGGCAGTGCTTCTCCCTGTTGTTATGACTCTCATTGCAAACCAGACAAGAGATAGTACCTTTATGAAGATCCTAGTACAAATGTGCTATCCCAAATGGGCTTTGGAGGCCTTTATTATTGCAAATGCTGAAAGGTATACTGGGGTGTGGCTGATAACTCGCTGTAGTTCACTGATGAATAGCGGTTATAATGTCAGTGATTGGCCTATCTGTCTAGCTGTCCTAATTTTTTATGGTATAGTTGCCAGAGTTGTGGCTTTTATTTGTCTAATAATCACCCAAAAGAAATGA | 3288 | 0.4091 | MRNYVPYILLFFFSFTLLLPNIQCADGTFAPSFYTEEIYKELQNIALLLNKDIKSSLGFCIKDPKNDWEEAFDFTGKLDFVDSCVKKKGDFRDRICTAAEIRYYFHGFLAQGASADNYVKPNKNCNLTSWVSGCEPGWGCSTGKDIDLKKDIKEIPQRTKNCQPCCEGFFCPQGLTCMIPCPLGSYCPLAKLNNKTGVCDPYSYQIPQGEMDHTCGSADIWSGVVNNSDIFCSPGSYCPTTTRRVSCDSGYYCRMGSTHQMACSKFSTCNPNTATQNMHAYGALLIVALSTVLIFIYNCSDQVLATRERRKAKSREAAARQVRETVQARERWKIAKDAAIRNKMGMQDQLSRTFSRRKSVKQGEQTKVFSQANPDTGNSLLQPPPVPPAQSSAATKGQKEPSNLTKMMNSLENDPHSNEGFNLQIGDKNIKKQMPKGRQLHTQSQILRYAYGQIEKEKAQQEKNNNLTFSGIISMAQEGEEVVTRPVIEVAFKDLTLTLKGKRKHLLRCVTGKIMPSRVSAVMGPSGAGKTTFLSALAGKTRGCTMTGSILINGKPESIHCYQKIIGYVPQDDIVHGNLTVEENLRFSARCRLSADLPKHDKVLIVERVIETLGLQAVRDSLVGTVEMRGISGGQKKRVNVGLEMVMEPSLLILDEPTTGLDSASSTLLLKALRREALEGVNICMVLHQPSYTLFRMFDDIIFLAKGGLTAYHGPVKKVEEYFAGIGITVPDRVNPPDHFIDILEGLVKPSTGVTYQQLPVRWMLHNGYPVPPDMLHYADEISASSSSSNPNLAIKGADEASDKSFAGEFWEDMKNNVQMRKDHIEATFLKTKDLSDRRTPGVARQYRYYLGRIGKQQLREAKSQAVDYLLLLVAGAILGTLTKVNDETFGSLGYTYTVIAVSLLCKIAALRSFSMDKLQYWRESASGISNLAHFLSKDTIDLFSTIVKPLIYLSMFYFFSNPRSSFGSNYAVLVCLVYCVTGMAYALAIYFEPAPAQLWAVLLPVVMTLIANQTRDSTFMKILVQMCYPKWALEAFIIANAERYTGVWLITRCSSLMNSGYNVSDWPICLAVLIFYGIVARVVAFICLIITQKK | 1095 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car04g01876 | 1095 | CDD | ABCG_EPDR | 488 | 714 | - | - | |
Car04g01876 | 1095 | ProSitePatterns | ABC transporters family signature. | 631 | 645 | IPR017871 | GO:0005524 | |
Car04g01876 | 1095 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 490 | 713 | IPR027417 | - | |
Car04g01876 | 1095 | Pfam | ABC transporter | 510 | 658 | IPR003439 | GO:0005524 | |
Car04g01876 | 1095 | Gene3D | - | 480 | 726 | IPR027417 | - | |
Car04g01876 | 1095 | PANTHER | ABC TRANSPORTER G FAMILY MEMBER 28 | 29 | 1091 | - | - | |
Car04g01876 | 1095 | MobiDBLite | consensus disorder prediction | 391 | 418 | - | - | |
Car04g01876 | 1095 | MobiDBLite | consensus disorder prediction | 364 | 379 | - | - | |
Car04g01876 | 1095 | SMART | AAA_5 | 516 | 708 | IPR003593 | - | |
Car04g01876 | 1095 | MobiDBLite | consensus disorder prediction | 345 | 418 | - | - | |
Car04g01876 | 1095 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 490 | 731 | IPR003439 | GO:0005524 | |
Car04g01876 | 1095 | PANTHER | WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED | 29 | 1091 | - | - | |
Car04g01876 | 1095 | Pfam | ABC-2 type transporter | 688 | 1095 | IPR043926 | GO:0140359 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car04g01876 | Car-Chr4 | 20288088 | 20307104 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car04g01876 | 521 | 710 | Calmodulin-binding Proteins | AT2G36910 | 28.788 | 1.52e-08 | 57.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car04g01876 | - | - | gmx:100812387 | 1885.15 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Car04g00978 | 04 | 9842636 | 9849995 | Car04g01876 | 04 | 20288088 | 20307104 | ECH | |
Car03g02485 | 03 | 70666044 | 70672914 | Car04g01876 | 04 | 20288088 | 20307104 | ECH | |
Car04g01876 | 04 | 20288088 | 20307104 | Car04g00978 | 04 | 9842636 | 9849995 | ECH | |
Car04g01876 | 04 | 20288088 | 20307104 | Car04g01876 | 04 | 20288088 | 20307104 | ECH |