Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01875 ATGGATCGGGAAGAATATTTGCGGAAGTGTTCCAATATGAAATGCCAAAGAGTTCAGGTGGATGAATCATATGCGCCTTCACTTCAAGATGATGAAATGGAAGTTGAGCATTTGCATGCAGAACCTAGAAATGAGCATGGTTCAATGGATGGCAATTTGGCTTCTCATATAGCTCTGAATGACAAGGATGATTTGGAACTGGAGGTCCTTGATGGATTCCTGGATGATGTTGAAATCGGTGATCTTGAAGGAACTGTTGGTTTTTCCGATGCATGTGGAGGGTTTTTCTTGGATTTTGATTTTGCCACCGACGTTGAGGTACTAGGCTCTGGTGCTTATGAAGACTCGCTTTTGGAAAACTCAAATTCAGAAAGTCATTCCCCAGGTTTTAGTGGAAGTAGCACCGCTGGTGGGATATCAGATTCAACAAATGTACCCAATAATTCACAATCTAAATGCAAAAATGATTCTTTAGATGAGACAGTTACCTACGATACACATGGAGTAAGGAGCAATCCAAGTCAGCCATCAAACATAGATTGCATGTACAACATTTCACTTGATATACAGCATCTGCATGAGTTGAACAATGATCATTCTTTAGCTGGTGGTATATTGTCTTGTAAGAAGGAAAATATTACTGGTGAACTATTCCGACCTGCTCCATCTAGAGAGAAGAGATTCCGAAAACCTACTCAGAGGTATATTGAAGAATCTTCAAATGCGAGATCAAAAGAAAAAGTACCAACTACTGGTGCAAAATGTAAACGACGTAGTTTGTCATCATGTAATGAACTTCATGTAAGAGTTAAAGGATTAAAAAAGATTCCATGCGAGAAGTCGAGTAATGGTAATAGTGATGTGACGCTTTCTGAGTTGCAACGTCGCAAGAAGAATCCAAAGAAAGAGAAACTTGAGTATGGCAATGAGCCATCTTCCTTAGAGGAGTTTGAGGACGAAAATTTGGCACCAAAAAGATGTAGAACAAAAGATCGTAGAAAGCAGCAAAGGATGTGGACAATCGCTGAAGTGACGAAGTTGGTTGATGGCATATCTGAATACGGAGTTGGTCGATGGACTGATATACAGAGGTTTCTGTTTTCTTCAAGTTACCGAACTCCCACAGATATCAGGGACAAGTGGCGTAACCTTTTAAGAGCTAGTTCAGCACAGAAATTCAACAAGAAAGAGGGTGAGCAAAATGACAAGAACGGCCCCCGTCTCTTACCTTTTAGTGTGGCAAGCCGAGTTCTGGAGTTGGCTAAAGTTCACCCATACCCAAGGCGCTCAAAGAAATCACGCGATAGGCAAGTTGGTTCTTCTGTTATTGAAAGCAAAGATTCTTCTGCTGTTAGTTTTGGCAGAAGAAATGTACGTAGGAAGAAGTGTACTTAG 1395 0.4079 MDREEYLRKCSNMKCQRVQVDESYAPSLQDDEMEVEHLHAEPRNEHGSMDGNLASHIALNDKDDLELEVLDGFLDDVEIGDLEGTVGFSDACGGFFLDFDFATDVEVLGSGAYEDSLLENSNSESHSPGFSGSSTAGGISDSTNVPNNSQSKCKNDSLDETVTYDTHGVRSNPSQPSNIDCMYNISLDIQHLHELNNDHSLAGGILSCKKENITGELFRPAPSREKRFRKPTQRYIEESSNARSKEKVPTTGAKCKRRSLSSCNELHVRVKGLKKIPCEKSSNGNSDVTLSELQRRKKNPKKEKLEYGNEPSSLEEFEDENLAPKRCRTKDRRKQQRMWTIAEVTKLVDGISEYGVGRWTDIQRFLFSSSYRTPTDIRDKWRNLLRASSAQKFNKKEGEQNDKNGPRLLPFSVASRVLELAKVHPYPRRSKKSRDRQVGSSVIESKDSSAVSFGRRNVRRKKCT 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01875 464 CDD SANT_TRF 337 386 - -
Car04g01875 464 MobiDBLite consensus disorder prediction 424 441 - -
Car04g01875 464 MobiDBLite consensus disorder prediction 424 464 - -
Car04g01875 464 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 8 462 - -
Car04g01875 464 ProSiteProfiles Myb-like domain profile. 331 385 IPR001005 -
Car04g01875 464 PANTHER TRF-LIKE 8 8 462 - -
Car04g01875 464 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 331 389 IPR017930 -
Car04g01875 464 SMART sant 335 387 IPR001005 -
Car04g01875 464 SUPERFAMILY Homeodomain-like 337 391 IPR009057 -
Car04g01875 464 MobiDBLite consensus disorder prediction 291 311 - -
Car04g01875 464 MobiDBLite consensus disorder prediction 281 320 - -
Car04g01875 464 Gene3D - 325 437 - -
Car04g01875 464 Pfam Myb-like DNA-binding domain 339 385 IPR001005 -
Car04g01875 464 MobiDBLite consensus disorder prediction 119 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01875 Car-Chr4 20271248 20278277 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car04g01875 Myb_DNA-binding 1.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01875 - - gmx:100810255 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01875 04 20271248 20278277 Car04g01875 04 20271248 20278277 ECH