Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01874 ATGAAATCAAGATTTTTGAGAGGGTGTATTAACAAATGCAAGAAAATGGGAAGCATAGTAAAAACTTGTGGTGTTTGTGAAGACTTTTGTGAAAGGGGTTTATGGTCTTCTTTGCATGAGAGTTGCTCAATACCAAGTGATGTTCCAAAAGGTCACATGGTTGTATATGTAGGTGAGAATCACAAAAGATATGTAATCAAAATTGTATTGCTACATCATCCACTTTTCAAGGCATTGTTGGATCAAGCTCAAGAAGAGTATGATTTCATTGCTCATTCAAAACTATGCATTCCTTGTGATGAACATCTTTTCCTAAATGTTGTTCGTTGTGCTGCCTCTCCACAAAACCAAAGGGTGTATTTGTGTCTATGA 372 0.3602 MKSRFLRGCINKCKKMGSIVKTCGVCEDFCERGLWSSLHESCSIPSDVPKGHMVVYVGENHKRYVIKIVLLHHPLFKALLDQAQEEYDFIAHSKLCIPCDEHLFLNVVRCAASPQNQRVYLCL 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01874 123 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 2 123 - -
Car04g01874 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 123 IPR003676 GO:0009733
Car04g01874 123 Pfam Auxin responsive protein 41 109 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01874 Car-Chr4 20258188 20258697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01874 10 118 Calmodulin-binding Proteins AT4G34750 38.596 1.06e-21 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01874 K14488 - gmx:100812927 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01874 04 20258188 20258697 Car04g01874 04 20258188 20258697 ECH