Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01867 ATGGCTTCTGTTAGATCAAGATCTGTAAGGTTTACTGATAATCTTGAAATGAAGAAATTAGAGGAAGGTGAAGATAGTGAAATGACAATGATGGCTTATGAGATGAGTAATAATCAACACAAGCATGAAAAGGATACAAAACACAAGTTATCAGCAAATGGAAGAGAACTTTCAAGAGTGTTTTCTGAAGATTATGATGCAGAAGAGATATTAATATTAGATCCTAGAGGACCTAGAGTAAATTTATGGAACAAAATTTTCTTAGCAGCTTGTTTGGTTTCATTGTTTGTGGATCCACTTTTCTTTTACTTACCAGTTGTTAAGAAAGAAAAGTGTATTGATATGTCACTTGGTCTTGAAGTTTCATTAACCATAATTAGGACTATGGTTGATGCATTTTATATTTTTCAGATTTATGTTAAGTTTCAAACTGCTTATATTGCTCCTTCATCTCGTGTTTCTGGTAGAGGAGAACTCATTATTGACTCATCAAAAATTGCATCAAATTATTTGAGTAGAGACTTTTGGGTTGATCTTGTGGCTGCACTACCACTTCCTCAGGTACTGATTTGGGGTGTAATACCAAATATGAAGGGGTCAGAAATGATTGCTTCAAGGCATGTAGTGCGCCTTGTGACAATTTTCCAGTTCTTATTGAGATTGTATCTTATTGGTCCTCTAAAAGCTGAAATCATCAAGGCAAATGGAGTAATGATGGAAAAAGCTTGGGCTGGTGCAGCATATAATTTGACACTCTACATGCTTGCTAGTCATGTTTTAGGATCTTGTTGGTACTTGTTATCAATTGAAAGACAAGATGAATGCTGGAAGAAAGTTTGCACACTTCAATATCCACACTGTCAGTATCATTATCTTGATTGTGAAAGCATAGGTGATCCAAATAGGAATGCTTGGCTTAGATCAAGCAACCTCTCAGGTCTATGTGATCAGAACAGTGACTTCTTTCAGTTTGGAATTTTTGCTGATGCTCTCACTTTGGAAATAACTGGCTCAGAATTCTTAAACAGATACTATTACTGTCTTTGGTGGGGACTCAGAAATCTAAGCTCTGCAGGACAGAATCTCTTAACAAGTACACATGTTGCAGAGATAAACTTTGCTGTGATTGTTGCAATTCTTGGATTGGTGCTTTTTGCACTACTCATAGGCAATATGCAAACGTACCTTCAATCCACCACTATAAGGCTGGAAGAGTGGAGAATTAGAAGGACAGATACAGAAAGATGGATGCATCACAGACAGCTACCTCGTTACCTGAAGCAAAATGTTCGACGGCATGACCAATTCAGATGGGTAGCTAATCGTGGTGTGGACGAAGAAGCTATCCTCAGAGACCTTCCTGTTGATCTCAGACGTGACATTAAACGCCACCTTTGCCTTAATCTTGTTAGACAAGTACCACTATTTGATCAAATGGATGACAGAATGTTAGATGCGATATGTGAAAGGCTGAAGCCAACACTAAGCACATCAGGAACTTGCATAGTTCGCGAAGGCGACCCCGTCACCGAGATGCTCTTCATTGTTCGAGGACGCCTAGATTCTTGCACAACAAATGGTGGCAGAACAGGTTTCTTCAACACCTGCACAATAGGCTCAGGTGATTTCTGTGGTGAAGAGCTTCTACCATGGGCCTTAGACCCTCGTCCAACCGTTGTACTTCCTTCATCAACTCGAACCGTGAAAGCCATCACCGAAGTCGAAGCCTTTGCACTCATCGCCGAGGATTTAAAATTCGTAGCAGCACAGTTCCGAAGATTACACAGCAAACAACTGAGACAAACATTTAGATTCTGTTCTCATCAGTGGAGAACATGGGCTGCATGTTTTATACAAGCTGCTTGGTTTAGGTATAAAAGAATGAAAGAAAGTAATGAGGTTAAGGAAATGGAGAATCTTATGATGATGGAAAATGTGCAATGTTATGGAAATGATGATAGTCAGTATTTCTCTGCACCTTTGCAGGCACCTAAGGGATCAAGTTATTCAATGTATTCTGGTAAACTTGTTGGTAGTTTAAGGAAAGGTAGGAGCATGAGATATGGTTCTGAAGATATTATTGGTTCATTATTGAGGAAGCCACTTGAACCTGATTTTAATGATGATGGTGGTTAA 2136 0.39 MASVRSRSVRFTDNLEMKKLEEGEDSEMTMMAYEMSNNQHKHEKDTKHKLSANGRELSRVFSEDYDAEEILILDPRGPRVNLWNKIFLAACLVSLFVDPLFFYLPVVKKEKCIDMSLGLEVSLTIIRTMVDAFYIFQIYVKFQTAYIAPSSRVSGRGELIIDSSKIASNYLSRDFWVDLVAALPLPQVLIWGVIPNMKGSEMIASRHVVRLVTIFQFLLRLYLIGPLKAEIIKANGVMMEKAWAGAAYNLTLYMLASHVLGSCWYLLSIERQDECWKKVCTLQYPHCQYHYLDCESIGDPNRNAWLRSSNLSGLCDQNSDFFQFGIFADALTLEITGSEFLNRYYYCLWWGLRNLSSAGQNLLTSTHVAEINFAVIVAILGLVLFALLIGNMQTYLQSTTIRLEEWRIRRTDTERWMHHRQLPRYLKQNVRRHDQFRWVANRGVDEEAILRDLPVDLRRDIKRHLCLNLVRQVPLFDQMDDRMLDAICERLKPTLSTSGTCIVREGDPVTEMLFIVRGRLDSCTTNGGRTGFFNTCTIGSGDFCGEELLPWALDPRPTVVLPSSTRTVKAITEVEAFALIAEDLKFVAAQFRRLHSKQLRQTFRFCSHQWRTWAACFIQAAWFRYKRMKESNEVKEMENLMMMENVQCYGNDDSQYFSAPLQAPKGSSYSMYSGKLVGSLRKGRSMRYGSEDIIGSLLRKPLEPDFNDDGG 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01867 711 Pfam Ion transport protein 82 401 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car04g01867 711 Gene3D - 88 399 - -
Car04g01867 711 PANTHER PROTEIN CNGC15A 18 708 - -
Car04g01867 711 SUPERFAMILY Voltage-gated potassium channels 74 397 - -
Car04g01867 711 Gene3D Helix hairpin bin 403 466 - -
Car04g01867 711 CDD CAP_ED 475 605 IPR000595 -
Car04g01867 711 PRINTS EAG/ELK/ERG potassium channel family signature 138 147 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car04g01867 711 PRINTS EAG/ELK/ERG potassium channel family signature 255 265 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car04g01867 711 PRINTS EAG/ELK/ERG potassium channel family signature 344 361 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car04g01867 711 PRINTS EAG/ELK/ERG potassium channel family signature 370 381 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car04g01867 711 PRINTS EAG/ELK/ERG potassium channel family signature 388 397 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car04g01867 711 PRINTS EAG/ELK/ERG potassium channel family signature 438 445 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car04g01867 711 SMART cnmp_10 475 606 IPR000595 -
Car04g01867 711 SUPERFAMILY cAMP-binding domain-like 405 597 IPR018490 -
Car04g01867 711 Gene3D Jelly Rolls 473 593 IPR014710 -
Car04g01867 711 ProSiteProfiles cAMP/cGMP binding motif profile. 475 560 IPR000595 -
Car04g01867 711 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 18 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01867 Car-Chr4 20114028 20118419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01867 53 709 Ion Channels AT2G28260 62.405 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01867 K05391 - gmx:100815543 1151.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01867 04 20114028 20118419 Car04g01867 04 20114028 20118419 ECH