Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01857 ATGGCATCCAATAGGGGTCAAGGAGGAATTCAGCAGTTGTTGGCTGCTGAACAGGAAGCACAACGGATTGTGAATGCTGCGAAAAATGAAAAATTGGCTAGGTTGAAACAGGCCAAAGAAGAAGCTGAAAAGGAGATCGCTCAATACCGGGCAAAGCTTGAGTCTGAGTTTCAAAAGAAATTGTCGGATACTAGTGGAGATTCTGGAGCTAATGTCAAGCGACTTGAGCAAGAAACTGAAGAAAAAATTGATCACCTGAAAACAGAGGCTTCAAGAATATCAGATGATGTTGTCGCCATGCTCCTCAAGTATGTAACAACTGTGAAACATTAG 333 0.4234 MASNRGQGGIQQLLAAEQEAQRIVNAAKNEKLARLKQAKEEAEKEIAQYRAKLESEFQKKLSDTSGDSGANVKRLEQETEEKIDHLKTEASRISDDVVAMLLKYVTTVKH 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01857 110 Coils Coil 10 59 - -
Car04g01857 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Car04g01857 110 Gene3D - 1 110 - -
Car04g01857 110 Coils Coil 76 96 - -
Car04g01857 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Car04g01857 110 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 1 109 - -
Car04g01857 110 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 3 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01857 1 110 Primary Pumps ATPases(2) AT3G01390 76.364 2.52e-46 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01857 K02152 - gmx:100306550 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01857 04 19903940 19908505 Car04g01857 04 19903940 19908505 ECH