Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01855 ATGAAGTTCCCATTTTTCGCTTGTTTCTCTTCATGGTCTACCGAACAAAACAACATCAACAACGATTATGGTGCTGACGGAGTAAACGATGGAGGCTTTCGTTCATTCACTTATAACCAATTGAAATCTGCCACTAATAATTTCGGTGACAAGATTGGACAAGGTGGATTTGGATCTGTTTATAAGGGGAGGCTCATGGATGGCTCATTTGTGGCAGTGAAAGTGCTTTCAATTGAGATTGAATCCATGCGAGGAGAGAGAGAATTTGTGGCAGAATTGGCTACACTAGCAAATATAAAGCACCAAAATCTTGTTGGCCTTAAAGGGTGTTGCGTAGAAGGAGCAAACAGATATTTAGTCTATGATTACATGGAGAATAATAGCCTCCACCACACTTTCCTAGGTTCTGAGGAGAGAAGGGTGAGATTCAGTTGGCAAAGAAGGAGGGATGTATCCATTGGTGTGGCTCGTGGGCTTGCATTTCTTCACGAGGAGGTGATGCCTCATATAGTACACAGAGACATCAAAGCCAAAAATATACTTATTGATCGAAATTTTACTCCTAAACTTGCAGACTTTGGTTTGGCCAAATTAATGAGAGATGAAACATCTTACATTAGCACTAGAGTTGCAGGGACATTGGGTTATTTGGCTCCAGAGTATGCTAGTTCTGGACAACTAAGAAGAAAATCAGATGTTTATAGCTTTGGAGTGTTGCTTTTACAAATTATCAGTGGTTTGGCGGTTGTAGATGCCTATACAGATATCGAACGTTTCATTGTAGAAAAGGCGTGGACAGCTTATGAGGCAAATGATCTATTAAGAATGGTAGATCCTGTGCTTAATACAGACTATTTAGAAGAAGAAGCCATAAAATTCCTCAAAGTGGGTTTACTTTGTGTTCAAGAAACCGCAAAACTTAGGCCACGAATGTCAGAGGTTGTACAAATGTTGACAAACAACAACACTGATATGAAAGATGTTCACATTTCAAAACCAGGATTTGTTGCTGATCTAAGAAACATAAGAATAAAAAAACATATGACAACAACCTCGCCACAAGAATCTAGTTCTTCAGGTGCAACATTTTCAAGCTCTAATTGGAGTGCGGGAAATCTCGCCCGTTGA 1128 0.3972 MKFPFFACFSSWSTEQNNINNDYGADGVNDGGFRSFTYNQLKSATNNFGDKIGQGGFGSVYKGRLMDGSFVAVKVLSIEIESMRGEREFVAELATLANIKHQNLVGLKGCCVEGANRYLVYDYMENNSLHHTFLGSEERRVRFSWQRRRDVSIGVARGLAFLHEEVMPHIVHRDIKAKNILIDRNFTPKLADFGLAKLMRDETSYISTRVAGTLGYLAPEYASSGQLRRKSDVYSFGVLLLQIISGLAVVDAYTDIERFIVEKAWTAYEANDLLRMVDPVLNTDYLEEEAIKFLKVGLLCVQETAKLRPRMSEVVQMLTNNNTDMKDVHISKPGFVADLRNIRIKKHMTTTSPQESSSSGATFSSSNWSAGNLAR 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01855 375 SUPERFAMILY Protein kinase-like (PK-like) 33 342 IPR011009 -
Car04g01855 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Car04g01855 375 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Car04g01855 375 ProSiteProfiles Protein kinase domain profile. 46 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01855 375 CDD STKc_IRAK 52 320 - -
Car04g01855 375 PANTHER RECEPTOR-LIKE KINASE 7 348 - -
Car04g01855 375 Pfam Protein kinase domain 49 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01855 375 SMART serkin_6 46 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01855 375 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 348 - -
Car04g01855 375 Gene3D Transferase(Phosphotransferase) domain 1 124 335 - -
Car04g01855 375 MobiDBLite consensus disorder prediction 348 375 - -
Car04g01855 375 Gene3D Phosphorylase Kinase; domain 1 11 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01855 Car-Chr4 19834437 19837741 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01855 35 318 Receptor kinase-like Gene Family AT1G53430 50.694 1.56e-90 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car04g01855 Pkinase 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01855 - - gmx:100813945 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01855 04 19834437 19837741 Car04g01855 04 19834437 19837741 ECH