Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01850 ATGAGCGTAATCGACATTCTAACCCGAGTTGATTCTATTTGCAAAAAGTACGACAAATACGACCTCGAAAAGAACAAGGATGCCAATGTCTCAGGCGATGATGCCTTCGTCAGACTCTACGCCTCTGTTGACTCCGACATCGACTCCCTACTCCAGAAAGCAGAAACTGCTTCCAAGGATAGAGGGAAGGCATCTGCTGTAGCGATTAATGCGGAGATTCGTCGTACTAAGGCTCGGTTGCTTGAAGAGGTTCCCAAGTTGCAGAGGTTGGCTATCAAAAAGGTAAAAGGGCTTTCGTCGCAAGAATTTGCTGCCCGTAATGATCTGGTTCTTGCGTTGCCAGAAAGAATCCAAGCTATCCCAGATGGGACTCCTGCTGCGCCAAAACAAACTGGTGGCTGGGCAGCTTCTGCCTCACGTGCTGAAATTAAATTTGATTCAGATGGGCGGTTTGATGATGAATACTTCCAGTCAACTGAGCAATCAAGTCAATTCAGGCAGGAATATGAAATGCGTAGAATAAGACAGGATCAAGGTTTAGATGTGATTGCAGAAGGATTGGATACTTTGAAAGACATGGCACATGATATGAATGAGGAACTGGATAGACAAGTTCCCCTGATGGACGAGATTGACAGTAAGGTCGACAAGGCGTCCTCTGATCTTAAGAATACTAATGTTAGACTTAAACACACCGTGAATCAGCTTCGATCCAGCCGAAACTTCTGTATTGATATTGTTTTATTGATTATAATTTTGGGAATTGCTGCCTACTTATACAATGTGCTAAAGAAATGA 798 0.4373 MSVIDILTRVDSICKKYDKYDLEKNKDANVSGDDAFVRLYASVDSDIDSLLQKAETASKDRGKASAVAINAEIRRTKARLLEEVPKLQRLAIKKVKGLSSQEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWAASASRAEIKFDSDGRFDDEYFQSTEQSSQFRQEYEMRRIRQDQGLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDSKVDKASSDLKNTNVRLKHTVNQLRSSRNFCIDIVLLIIILGIAAYLYNVLKK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01850 265 SMART tSNARE_6 165 232 IPR000727 -
Car04g01850 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 176 232 IPR000727 -
Car04g01850 265 SUPERFAMILY SNARE fusion complex 163 230 - -
Car04g01850 265 CDD SNARE_Qc 175 231 - -
Car04g01850 265 ProSitePatterns Syntaxin / epimorphin family signature. 176 215 IPR006012 GO:0005484|GO:0006886|GO:0016020
Car04g01850 265 Pfam SNARE domain 207 256 IPR000727 -
Car04g01850 265 Gene3D - 171 231 - -
Car04g01850 265 PANTHER SYNTAXIN-73 1 261 - -
Car04g01850 265 PANTHER SYNTAXIN 1 261 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01850 Car-Chr4 19766084 19771283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01850 1 264 SNARE and Associated Proteins AT3G09740 74.436 1.53e-151 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01850 K08506 - gmx:100786529 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01850 04 19766084 19771283 Car04g01850 04 19766084 19771283 ECH