Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01848 ATGGCCACCAAGCATCGTTCTAATTCTTCTTTCCTCTTTCTATTGCTCCTCCTACATTTTATTTTGGGGAAAAGCCAGCTACAAGTGAACTACTACTCCAAGAGCTGCCCAAAAGCGGAAGAGATCATCAAGCAACAAGTCACTGAACTATATAACGAGCATGGAAACACAGCCATTTCGTGGGTTAGAAATCTCTTCCATGATTGCCTAGTCAAGGCATGCGATGCATCCCTACTTTTAGAAACGGTGCACGGTGTAGTATCGGAACAGACATCCGAGAGAAGTTTTGGGATGAGAAACTTCAAGTATGTCAACACCATCAAAGCGGCTGTTGAGAAAGAATGCCCCTTGACGGTTTCATGCGCTGATATTGTTGCTCTTTCCGCTAGAGACGGCATTGCCATGTTGGGAGGTCCAAACATTGAAATGAAGAGTGGACGAAGAGATAGCAAAGAAAGCTACGTTAAGGTGGTGGAAGACTTCATTCCCAACCACAATGACTCCATATCCTTAGTGCTCTCTCGTTTTCAAGCCATTGGCGTTGACGTTGAAGCCACTGTTGCTCTTTTAGGAGCACACTCAGTGGGAAGAGTACACTGCATGAATATAGTACATAGACTATACCCCACAGTGGACACAACATTAGACCCTACACATGCTGCCTATCTCAAACGTAGGTGTCCAACACCAAATCCAGATCCAAAAGCTGTCCAATATGTAAGGAACGATCTAAAAACTCCCATGATAATTGACAACAACTACTACAAAAACATCTTGCAACATAAGGGTCTTCTCACTGTCGATGAAGAATTGGCCAATGACCCTATAACAGCACCTTATGTACAAAAGATGGCTGATGATAATACTTACTTCCGTCAACAATTCTCAAGGGCTGTTCTTTTGTTGTCTGAGAATAATCCTCTTACTGCCGATGATCAAGGTGAAATTAGAAAGGATTGTCGCTATGTTAATGCTAATTAG 981 0.4281 MATKHRSNSSFLFLLLLLHFILGKSQLQVNYYSKSCPKAEEIIKQQVTELYNEHGNTAISWVRNLFHDCLVKACDASLLLETVHGVVSEQTSERSFGMRNFKYVNTIKAAVEKECPLTVSCADIVALSARDGIAMLGGPNIEMKSGRRDSKESYVKVVEDFIPNHNDSISLVLSRFQAIGVDVEATVALLGAHSVGRVHCMNIVHRLYPTVDTTLDPTHAAYLKRRCPTPNPDPKAVQYVRNDLKTPMIIDNNYYKNILQHKGLLTVDEELANDPITAPYVQKMADDNTYFRQQFSRAVLLLSENNPLTADDQGEIRKDCRYVNAN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01848 326 PANTHER PEROXIDASE 25-RELATED 14 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g01848 326 PANTHER PEROXIDASE 21 14 323 - -
Car04g01848 326 Gene3D - 30 324 - -
Car04g01848 326 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g01848 326 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g01848 326 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g01848 326 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g01848 326 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g01848 326 ProSiteProfiles Plant heme peroxidase family profile. 26 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g01848 326 SUPERFAMILY Heme-dependent peroxidases 26 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car04g01848 326 Pfam Peroxidase 44 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car04g01848 326 CDD secretory_peroxidase 26 323 IPR033905 GO:0004601|GO:0042744
Car04g01848 326 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g01848 326 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g01848 326 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g01848 326 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g01848 326 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g01848 326 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g01848 326 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g01848 326 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car04g01848 326 Gene3D Peroxidase, domain 2 163 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01848 Car-Chr4 19730727 19734658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01848 29 324 Peroxidase AT2G37130 74.074 1.39e-168 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01848 K00430 - gmx:100811277 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01848 04 19730727 19734658 Car04g01848 04 19730727 19734658 ECH