Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01843 ATGGGGAAGAATGCAAATTGGTTTTCCAATGTGAAGAAAGCTCTCAGCCCTGACTCAAAGGAAAACAAACACCAGAATTCAAGTGGATCAAAGAAGAAATGGTTTGGGAAGAAAAAATTACAGACTCAGGACTCATACTTAGAAACTGATAATGCAcctcctccttctcctcctcctGAGGAGATTATTTTAACCCATGTTGAGAATATTGAAAACAATCATGATCATGTTGAAGTTGCAACAGATTTGGATGCTGAGGTACATGTTCCTGCTGTTCAAACACAAATTGCTGAAGTTCAAGTCACTGCAGTTGTTCAGTTTGACAGTAAAGTAAAGGATGAAGTTGCAGCAACCAAGATTCAAACAGCTTTTCGCCGATACTTGGCAAAAAGAGCTTTGCGGGCTTTAAGGGGGCTGGAAAGGTTAAGATTGCTAATGGAAGGGCCAGTTGTAAAGCGTCAAGCCAATAGTACCCTCCGCTCTATGCAGACGTTAGCTCATGTGCAATCGCAGATTCGTTCAAGGCGGCTCAGGATGTTAGAGGAGACTCAAGCTCTGCAAAAACAACTCTTACAGAAACACACAAAAGAGCTAGAGAGCATGCAGATTGGAGAGGAATGGGATGAAAGTCTACAATCAAGAGAACAAATTGAAGCGAAGTTACTAAGCAAGTTTGAGGCTGCTATGAGAAGAGAAAGAGCAATGGCTTATTCGTTCACTCATCAGAAAAATGGGAAGAATTCATCGAAATCTATTAACCCAATGTTCATGGATCCAACCAATCCTACTTGGGGATGGAGCTGGCTGGAACGTTGGACGGCAGCCAGGCCGTGGAAGAGCCAAAGCCTAATTGAAAAAGAGAAGAACAACAATTCAGCTGTAAAAAGTTTAAGCCGCGGCATTACCAGCGCTGAAATCAGCAAATCATTTGCTCGTTTCCAGCTCAATTCCGAAAATCATTCTCCAACAGCCAGCCAAAATCCAGGTTCGCCGAACTTCCATTCAAATTCAAAGCCTCCCAAGCCAGCAGTTGGCAAAAAACTGAATAAGGCAAGCCCAAAGGAGAGTTGTATTATCGATGATGATACCAAAAGCATGATGAGTGTGCAGTCGGAGCGAGTTCGGAGGCACTCCATTGGTGGATTAACAGTGAGGGATGATGAAAGCCTTGCAAGCTCTCCATCAGTTCCAAGTTACATGGTGCCAACTAAATCTGCAAAAGCTAAGTCCAGGTTGCAAAGTCCATTAGCTGCAGAGAATGGAACAGTACCAGAGAAAGGGTCCGTTGGAACTGCAAAGAAACGGCTTAGTTTCCCGGCTTCGCCTGCCAGATCAAGGCGGCATTCAGGTCCACCGAAGGTAGAAAGCAGCTTAATTGCAGAAATTACTGTTGGCAGTGGTGTGGCTGGTTGA 1413 0.4338 MGKNANWFSNVKKALSPDSKENKHQNSSGSKKKWFGKKKLQTQDSYLETDNAPPPSPPPEEIILTHVENIENNHDHVEVATDLDAEVHVPAVQTQIAEVQVTAVVQFDSKVKDEVAATKIQTAFRRYLAKRALRALRGLERLRLLMEGPVVKRQANSTLRSMQTLAHVQSQIRSRRLRMLEETQALQKQLLQKHTKELESMQIGEEWDESLQSREQIEAKLLSKFEAAMRRERAMAYSFTHQKNGKNSSKSINPMFMDPTNPTWGWSWLERWTAARPWKSQSLIEKEKNNNSAVKSLSRGITSAEISKSFARFQLNSENHSPTASQNPGSPNFHSNSKPPKPAVGKKLNKASPKESCIIDDDTKSMMSVQSERVRRHSIGGLTVRDDESLASSPSVPSYMVPTKSAKAKSRLQSPLAAENGTVPEKGSVGTAKKRLSFPASPARSRRHSGPPKVESSLIAEITVGSGVAG 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01843 470 MobiDBLite consensus disorder prediction 318 337 - -
Car04g01843 470 PANTHER IQ-DOMAIN 5-RELATED 1 464 - -
Car04g01843 470 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Car04g01843 470 MobiDBLite consensus disorder prediction 1 15 - -
Car04g01843 470 Gene3D iswi atpase 110 137 - -
Car04g01843 470 Pfam Protein of unknown function (DUF4005) 391 449 IPR025064 -
Car04g01843 470 MobiDBLite consensus disorder prediction 318 458 - -
Car04g01843 470 MobiDBLite consensus disorder prediction 1 60 - -
Car04g01843 470 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 464 - -
Car04g01843 470 MobiDBLite consensus disorder prediction 353 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01843 Car-Chr4 19637267 19641019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01843 1 467 IQD Protein Family AT5G03040 51.255 4.88e-141 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01843 - - gmx:100801847 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01843 04 19637267 19641019 Car04g01843 04 19637267 19641019 ECH
Car03g02458 03 70385751 70389917 Car04g01843 04 19637267 19641019 PCT