Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01825 ATGGGTTGGATTCCATGTTCTGGAGGTTCCAACAGTAACACTAAGAAGAAGATAAAGAAGAAATTGGAGGAAGTGCAGGACATGCGTGATTCGATCAAAGCTAACCCAGGGAAATTGAAGAAGAATTCATCTATGAATTCCAGAAGTTCCTCTAAAAATGGAGACTCTGATCACATTGCTGCACAAACATTCCCTTTCCGTGAGTTAGCAACTGCTACTAGAAATTTTAGAGCAGAATGTCTTTTGGGCGAGGGAGGCTTTGGCAGAGTATACAAAGGGCATTTGGAAACTATTAATCAGACTGTTGCAATTAAGCAACTTGACCGAAATGGGCTACAAGGGAATAGAGAATTCCTTGTTGAAGTGTTGATGTTAAGTCTTCTTCACCACTCTAACCTTGTCAACCTGATTGGTTATTGTGCTGATGGAGATCAAAGGCTTCTAGTTTATGAATATATGCCATTAGGATCATTGGAAGACCACTTACATGATATTTCTCCCAGCAAGAAACGACTCGACTGGAACACGAGAATGAAAATAGCTGCGGGGGCAGCAAAAGGGTTGGAATATCTACACGACAAAGCTAACCCTCCTGTCATATACCGAGATTTAAAGTGCTCGAACATTTTGCTTGGTGAAGGGTATCATCCTAAGTTGTCTGATTTTGGTTTGGCTAAAGTTGGCCCTGTGGGGGAAAACACCCATGTATCAACAAGGGTTATGGGAACCTATGGATATTGTGCTCCAGAGTATGCAATGACAGGTCAACTGACTCTGAAATCAGATGTTTATAGCTTTGGTGTAGTTTTGCTGGAAATAATTACTGGAAGGAAAGCGATTGACAATTCAAAATGTGCGGCTGAACAGAATCTTGTTGCATGGGCTAGACCCTTGTTTAAAGATCGAAGAAAATTCACACAAATGGCTGATCCAATGCTCCAAGGTCAGTATCCTTCAAGAGGGATATACCAGGCCCTTGCCGTTGCAGCAATGTGCGTTCAGGAGCAGGCAAATATGCGTCCAGTTATAGCTGATGTTGTGACAGCTTTGAGTTACCTTGCTTCACAAAGATATGCGCCCAATACACAGACAGTACAAAACTCTCGCCTCGGTCCTGGTACTCCTCCTAGAACCAGGAGGGGTATTTGA 1149 0.4273 MGWIPCSGGSNSNTKKKIKKKLEEVQDMRDSIKANPGKLKKNSSMNSRSSSKNGDSDHIAAQTFPFRELATATRNFRAECLLGEGGFGRVYKGHLETINQTVAIKQLDRNGLQGNREFLVEVLMLSLLHHSNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDISPSKKRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKCAAEQNLVAWARPLFKDRRKFTQMADPMLQGQYPSRGIYQALAVAAMCVQEQANMRPVIADVVTALSYLASQRYAPNTQTVQNSRLGPGTPPRTRRGI 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01825 382 ProSitePatterns Protein kinases ATP-binding region signature. 82 105 IPR017441 GO:0005524
Car04g01825 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Car04g01825 382 Gene3D Phosphorylase Kinase; domain 1 46 152 - -
Car04g01825 382 MobiDBLite consensus disorder prediction 363 382 - -
Car04g01825 382 SUPERFAMILY Protein kinase-like (PK-like) 62 362 IPR011009 -
Car04g01825 382 MobiDBLite consensus disorder prediction 1 58 - -
Car04g01825 382 MobiDBLite consensus disorder prediction 37 58 - -
Car04g01825 382 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL7-RELATED 1 380 - -
Car04g01825 382 MobiDBLite consensus disorder prediction 16 36 - -
Car04g01825 382 Coils Coil 11 35 - -
Car04g01825 382 CDD STKc_IRAK 82 350 - -
Car04g01825 382 Gene3D Transferase(Phosphotransferase) domain 1 153 370 - -
Car04g01825 382 Pfam Protein tyrosine and serine/threonine kinase 80 349 IPR001245 GO:0004672|GO:0006468
Car04g01825 382 PANTHER OS07G0668900 PROTEIN 1 380 - -
Car04g01825 382 SMART serkin_6 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01825 382 ProSiteProfiles Protein kinase domain profile. 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01825 Car-Chr4 19388505 19393479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01825 29 355 Glycoside Hydrolase AT3G07070 66.667 5.78e-165 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Car04g01825 PK_Tyr_Ser-Thr 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01825 - - gmx:100776041 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02443 03 70264609 70267152 Car04g01825 04 19388505 19393479 PCT