Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01816 ATGGAAGAAACAACAGCAACCATCATGGCTTCACTTTCAACCCTCACTCCATCTCACCTCACACATCTCACTAACTCAATTCTCTCGTCAACTCGCCGCCACCACCGCCGTCTCACTTTCCTCCTCTCTTCCCCAACTCTCTTTTCACTAACCCTTCATCACCTCCACACTCTCTCTCTCCCCCAAAAGTCTCTCCTCATTTCCCGCCATCTTCTTTCCTCTCTCCACCTCCTCACTCGCCACATCCAATCAAACTACGCCACGTCACCTAAACCGCTTCCACCTCCAATCTCAACCTCTTTAACAGAGCGTGAACTCGACGCAGTTTTGCTCCTTCTCATGCTCTGCGAAACACATAAACATAACCCCGAAGCACTTAACGCACCGTTTTGTAATTGGAGGGTGAATTTAAGAAATATTTTCTCCGTTACATTGTTGACGGTTTCTTCTTATTCTGCGCCGCCGCTTGGTGCTTGTTTGGGATCTGTTTTGATTCCGTTTGTTGAGATGGTGAGTCGGTGTTGGAGATTGGTGGGAGTTTTGGGTTGTGACGGTCGTGATGAAGGGGGGAAGGGAGTTAAGGAGGTGGCGGCTTCGGCGACGGTGGTGGcgaacatgttgcgcattatcatgggttgctcgtcggttgaggcaatacatgttatgtcatacaacttggttgatgtctaa 690 0.4406 MEETTATIMASLSTLTPSHLTHLTNSILSSTRRHHRRLTFLLSSPTLFSLTLHHLHTLSLPQKSLLISRHLLSSLHLLTRHIQSNYATSPKPLPPPISTSLTERELDAVLLLLMLCETHKHNPEALNAPFCNWRVNLRNIFSVTLLTVSSYSAPPLGACLGSVLIPFVEMVSRCWRLVGVLGCDGRDEGGKGVKEVAASATVVANMLRIIMGCSSVEAIHVMSYNLVDV 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01816 229 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 2 108 - -
Car04g01816 229 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SGR9, AMYLOPLASTIC 2 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01816 Car-Chr4 19234907 19236274 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01816 2 182 C3H Transcription Factor Family AT5G02750 46.448 3.55e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01816 - - cam:101496426 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01816 04 19234907 19236274 Car04g01816 04 19234907 19236274 ECH