Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01810 ATGGACAAGTCGTGGAGTTTCTCGTCAAGAAACAGTAATAGTAATGGGAGACAACAATGGGAATTAGGAGATTTAGAGGAGCATCTCCATGAACGAGATCTGACCTCTCTCCCACAAGTTTTGGAAGACGTGGATTGTTTTCTCAATAGCATCACAACAAGTTCTCCTCAAAAAGAAGTTCCTAATTGTGTAGTCGTGTTGACCAAATTGTTGGATTATATGATGGATAAATACAAGAGAAGCAAGTTTGGGCAAGAGCCAAAATTTGACAAGTACTTTCTAAATGGTGTGGATCGCATCTTCAAACTATCAAACACCTTGAGTTTGAGTCCTTCCTGCTTAGACAAAACAAGTTCCGTCCTAGAAAAAGCAATGTCTATTTTAGAAAATGACCTTTGCGCCCTTCTTCAGGACCCTAAATCCAAAACTAATTATTCTCGACCGGCAGTACCACCAAAGAAATCATCATCCTTTGGTTCCCTTCAACTTCAATTTCAACTTCAGGATGAAAGGGAAATCCCAAGGCCTAACAATCAAGATCATGATGACGACGACTTATTGCCAACTTTCTCAACAGAAAATATTTCCATTATGAACAAAATTGCCGACGTTATGATTAACATGGGCTACCATACAGAGTGTTGCATGACCTTTACCAATTTTAGGCGAAATTATTTCAAAGCTGCATTGCGAAAATTGGGACAAACGGGTGTAAGAATGGAGGAGGTTTATAAAATGCAATGGGAATCGTTGGAAGGAGAAATAGCTACGTGGAACAAAGTTTTTCGACATTGCACGACAGTGCTTTTTAATGCTGAACGAAAGCTATACGAATCCATATTTCCAAATCAACACTCTGTATCTCAAGGCATGTTTGGTAATCTTGCAAGAGGTGTTATCATCAATTTTTTGAATTTTGCACAAGCGGTGGTTTTAACCAAACCATCACCAGAAAAATTGTTCAAATTCTTGGATATGTATGAGACCCTAAGAGATGACGTGGAGCCTGTTGTCTTACTCATTAATGACCAAACTtcctcctcctcttcctcctccATATATCCTTACGATATAGAGCAGTGTGCCAAGGAGCTTGCATTCGAGATAGCCACAACAAAGGATAGGATCGTAGACGCTGTCATGGCGATGTTCAGTGATTTAGAAAACAACATTAAGGGTGACAATGAAAGGATTCCGGTTCCTTATGGTGCGGTTCATCCATTGACCCGTTATGTCATGAATTATCTTAAATATACATGTGAGTACAAAGACACGTTGGAGCAAGTGTTTGAGCAATGTCATTGCaatgataataataataataCAGTATTACAAGAGGGCACAAAGGCGAGCACAACCAATACTCAAAATGAAAAAAATAATAGTACAATAGAAGAGGAATCAGAGGGGACACCTAATAGATCACCTTTTGCGGTTCAATTGATGGCAATCATGGACCTTTTGGATGCCCATACCGAAAGAAAGTCCAAGCTATATAAGGATTCGTCTTTACGATGTGTTTTTCTAATGAACAATGGGAGATACATAGTGCAGAAGATAAAAGGGTGTGCTGATCTTCACGAGTCAATGGGCGATAATTGGTGTCGAAGAAAACAATTTAGTCTGAGGTTGCACCATAAGAATTATCAGATAGATACTTGGAGTAAAGTGTTGCAGTGCCTCAACCCAGATGGTCTGCATCAACAAGGAAACAAGGTGTCTAAACAAGTTTTAAGAGAGAAGTTTAAGTGCTTCAATGCGATGCTTGAAGAGATCCACAAGACACAGAGCACTTGGATGGTGAGTGATGACCAACTTCAATCGGAGCTGAGGGCTTCAATATCTGCTTTGGTCATACCTGCTTATCGATCCTTTCATGGAAGATTCAAACATCATCTAGAATCAGGTAGACATAGTGACAAATACATTAAGTATCATCCCGACGACATTGAGACTTTGATTGACGATTTGTTTGTAGGAAATAATACGTCTATGTCTCGAAGGAGGACATAA 2013 0.387 MDKSWSFSSRNSNSNGRQQWELGDLEEHLHERDLTSLPQVLEDVDCFLNSITTSSPQKEVPNCVVVLTKLLDYMMDKYKRSKFGQEPKFDKYFLNGVDRIFKLSNTLSLSPSCLDKTSSVLEKAMSILENDLCALLQDPKSKTNYSRPAVPPKKSSSFGSLQLQFQLQDEREIPRPNNQDHDDDDLLPTFSTENISIMNKIADVMINMGYHTECCMTFTNFRRNYFKAALRKLGQTGVRMEEVYKMQWESLEGEIATWNKVFRHCTTVLFNAERKLYESIFPNQHSVSQGMFGNLARGVIINFLNFAQAVVLTKPSPEKLFKFLDMYETLRDDVEPVVLLINDQTSSSSSSSIYPYDIEQCAKELAFEIATTKDRIVDAVMAMFSDLENNIKGDNERIPVPYGAVHPLTRYVMNYLKYTCEYKDTLEQVFEQCHCNDNNNNTVLQEGTKASTTNTQNEKNNSTIEEESEGTPNRSPFAVQLMAIMDLLDAHTERKSKLYKDSSLRCVFLMNNGRYIVQKIKGCADLHESMGDNWCRRKQFSLRLHHKNYQIDTWSKVLQCLNPDGLHQQGNKVSKQVLREKFKCFNAMLEEIHKTQSTWMVSDDQLQSELRASISALVIPAYRSFHGRFKHHLESGRHSDKYIKYHPDDIETLIDDLFVGNNTSMSRRRT 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01810 670 MobiDBLite consensus disorder prediction 444 473 - -
Car04g01810 670 PANTHER EXOCYST COMPLEX PROTEIN EXO70 27 661 IPR004140 GO:0000145|GO:0006887
Car04g01810 670 Pfam Exo70 exocyst complex subunit 257 656 IPR046364 GO:0000145|GO:0005546|GO:0006887
Car04g01810 670 Gene3D Exocyst complex component Exo70 67 668 - -
Car04g01810 670 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 27 661 - -
Car04g01810 670 SUPERFAMILY Cullin repeat-like 92 658 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01810 Car-Chr4 19155689 19157824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01810 37 669 EXO70 exocyst subunit family AT5G13150 44.186 3.48e-176 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01810 K07195 - mtr:MTR_1g117090 920.613