Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01809 ATGGGTTGTTTTTCGTGTTTCGATTCGAAGGAGGATGAAAAGCTGAATCCTAATCCTCAGCAGGNNNNNNNNNNNNNNCATAATCTCCCTTCCCATCTTTCCAGATTGCCCTCTGCCTCTGCAGCGGAGAAACTGAGATCAACAAGTAACGGAGCGTCCAAAAGGGAATTGCCTGTTGCTCTCAAAGATGGACCACCTGGCCAAATCGCCGCTCAAACTTTTACTTTCCGTGAACTTGCGGCTGCAACAAAAAACTTCAGGCCCCAGTCCTTTTTAGGGGAAGGTGGTTTCGGAAGGGTCTACAAGGGACGCCTAGAAACCACCGGTCAGGCTGTTGCTGTTAAACAGTTAGACCGAAACGGTCTCCAGGGTAATCGGGAATTCCTTGTGGAGGTTCTCATGCTCAGTCTTCTACACCACCCTAACCTTGTGAATCTCATTGGATACTGTGCGGATGGGGACCAACGCCTCCTGGTTTATGAATTTATGCCATTGGGATCATTGGAAGACCACCTTCATGATCTTCCCCCTGATAAGGAGCCATTAGATTGGAACACTAGAATGAAAATAGCTGCAGGTGCTGCAAAAGGATTGGAATACCTGCACGACAAGGCAAATCCTCCAGTAATTTATAGGGACTTCAAATCATCTAATATATTACTTGATGAAGGTTATCACCCAAAGCTTTCGGACTTTGGTCTGGCAAAGCTTGGTCCTGTTGGGGACAAATCACATGTTTCCACTCGTGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCTATGACTGGACAACTGACTGTGAAATCTGACGTATATAGTTTTGGTGTAGTCTTCTTGGAGCTGATTACTGGCCGTAAAGCCATTGACGGCACCCGGCCCCATGGAGAACAAAACCTTGTCACATGGGCACGTCCATTGTTCAATGACCGCAGGAAGTTTCCAAAGTTGGCAGATCCACGGTTGCAGGGGCGGTATCCCATGCGGGGTCTTTACCAAGCTCTAGCTGTAGCATCAATGTGCATTCAAGAACAGGCTGCTGCACGTCCTCTGATTGGGGATGTGGTGACGGCCCTCTCTTATCTAGCCAACCAGGCATATGACACTAACAATGCTGGGCATGGTAATAATAAGGGAATTGGTGATGATAAAGGTGGAAAAATATTAAAAAATGATGGAGGGGGAGGATCTGGACGCAGATGGGATTTGGAAGGATCAGAGAAAGACGACTCCCCACGTGAAACTGCAAGGATGTTAAACAGGGATCTTGATAGAGAACGAGCTGTGGCTGAAGCCAAGATGTGGGGAGAGAACTTGAGAGAAAAAAGACGACAGAGTGTGCAGGGCAGTTTTGATGCTTCTAATGCCTAG 1374 0.4694 MGCFSCFDSKEDEKLNPNPQQXXXXXHNLPSHLSRLPSASAAEKLRSTSNGASKRELPVALKDGPPGQIAAQTFTFRELAAATKNFRPQSFLGEGGFGRVYKGRLETTGQAVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDGTRPHGEQNLVTWARPLFNDRRKFPKLADPRLQGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSYLANQAYDTNNAGHGNNKGIGDDKGGKILKNDGGGGSGRRWDLEGSEKDDSPRETARMLNRDLDRERAVAEAKMWGENLREKRRQSVQGSFDASNA 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01809 457 PANTHER OS07G0668900 PROTEIN 1 452 - -
Car04g01809 457 SUPERFAMILY Protein kinase-like (PK-like) 69 360 IPR011009 -
Car04g01809 457 Gene3D Transferase(Phosphotransferase) domain 1 163 383 - -
Car04g01809 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Car04g01809 457 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Car04g01809 457 MobiDBLite consensus disorder prediction 7 62 - -
Car04g01809 457 MobiDBLite consensus disorder prediction 369 424 - -
Car04g01809 457 CDD STKc_IRAK 92 360 - -
Car04g01809 457 Gene3D Phosphorylase Kinase; domain 1 70 162 - -
Car04g01809 457 Pfam Protein kinase domain 89 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01809 457 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01809 457 MobiDBLite consensus disorder prediction 402 424 - -
Car04g01809 457 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 1 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01809 Car-Chr4 19117355 19127666 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01809 1 445 Glycoside Hydrolase AT3G07070 56.570 4.34e-169 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Car04g01809 Pkinase 4.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01809 K13430 - tcc:18608901 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01809 04 19117355 19127666 Car04g01809 04 19117355 19127666 ECH
Car04g01809 04 19117355 19127666 Car01g02538 01 51112300 51115077 ECH