Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01803 ATGGGCTCATGTCTTTCAGGGGCTTCTTCAGCTCCTTCATTTCCTCTTGATACCAATCATTATTATGAAAGCTATCAATATTCACGTGTTTCAAATATGGAAATGAGATTGCACAGAATTCCAAGCAGAATATTCTTGAATGGTTCCACTCCTGTTGCCTCCTTGTTCTGTAAGCAAGGCAGAAAGGGAATCAACCAGGATGCAATGCTTCTTTGGGAGAATTTTTGTTTGATGAAGGACAGCGTACTTTGTGGTGTATTTGATGGTCATGGACCATTTGGACATGTGGTCGCCAAGAAAGTCAGAGATTCTCTCCCTTTAAAGCTAATGGATGAATGGAATTTAAGTGGTGGTCATCATTGTAGCACACTCAAAGAATCGTTTTTGAAAGCTTCTAAGTCTATGGACAGAGAACTCAGTTTGCACCATCGCAAGGATGCTTATGCCAGTGGGACTACCGCCGTTACCTTGCTCAAGAAGGGCTACGAACTTGTTATTGCAAATGTTGGAGACTCTAGAGCTGTTTTAGGTACTAAAGATCCTAATGGTTCTCTTATTGCTCTTCAATTGACCACTGACCTTAAGCCAAATCTTCCAAGGGAAGCAGAGAGGATAAGGCTTTGCAAAGGAAGGGTGTTTGCCCATGACAACGAATCAGGAGTTGCTCGAGTTTGGCTGCCTAACGTTGACTCCCCTGGCCTTGCTATGGCACGCGCTTTTGGCGATTTTTGCCTCAAGGATTTTGGACTCATATCTGTTCCTGACATCTCCTATCATCGCCTCTCAGAACAAGATCAATTTGTTGTCTTAGCCACAGATGGTGTTTGGGATGTTTTGTCCAACAAACAAGTTGTGGACATAGTAGCATCTGCTCCACGATCTTCTGCGGCTAAAGTACTTGTTGAGTCAGCTGTTCAAGCATGGAGGACCAAGCTACCAACTTCTAACCCTGATGATTGCTCTGCAGTTTGCCTCTTCTTTCATTCACACACCAACACTACCCCTGACACTAATATAGTTGGGGGAGAGGAGGGAACAAGGGAATCACACTGCAAAACTAAACAAAAGCACCAATAG 1077 0.4373 MGSCLSGASSAPSFPLDTNHYYESYQYSRVSNMEMRLHRIPSRIFLNGSTPVASLFCKQGRKGINQDAMLLWENFCLMKDSVLCGVFDGHGPFGHVVAKKVRDSLPLKLMDEWNLSGGHHCSTLKESFLKASKSMDRELSLHHRKDAYASGTTAVTLLKKGYELVIANVGDSRAVLGTKDPNGSLIALQLTTDLKPNLPREAERIRLCKGRVFAHDNESGVARVWLPNVDSPGLAMARAFGDFCLKDFGLISVPDISYHRLSEQDQFVVLATDGVWDVLSNKQVVDIVASAPRSSAAKVLVESAVQAWRTKLPTSNPDDCSAVCLFFHSHTNTTPDTNIVGGEEGTRESHCKTKQKHQ 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01803 358 Pfam Protein phosphatase 2C 65 304 IPR001932 -
Car04g01803 358 ProSiteProfiles PPM-type phosphatase domain profile. 52 327 IPR001932 -
Car04g01803 358 SUPERFAMILY PP2C-like 46 329 IPR036457 -
Car04g01803 358 PANTHER ALPHABET, ISOFORM E-RELATED 1 334 - -
Car04g01803 358 SMART PP2C_4 41 325 IPR001932 -
Car04g01803 358 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 1 334 - -
Car04g01803 358 MobiDBLite consensus disorder prediction 336 358 - -
Car04g01803 358 CDD PP2Cc 52 327 IPR001932 -
Car04g01803 358 Gene3D - 48 330 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01803 Car-Chr4 19059865 19061504 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01803 37 354 PP2C-type Phosphatase Gene Family AT1G16220 49.865 7.86e-130 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01803 - - cam:101504803 731.865