Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01790 ATGGTGCGCAAAGACAACAACAACgaggaggaggaggaggaggaagaggaACAAGTTTCACGACGCGTGAAAAGAGAACGCCTCAGTGAAAACAACGCCGCCTCTGATCATCAGGACACCACCAGTCGTAGAATCATCCGCTCCGAGTTTCTCAAACTCAAGTCTATCATCAATGAGAAAAAGGATGATTTAATTAACAGTGATTCTGACAAGTTCGAATCAATCCTCAACGAGTTCGACAAGTTACACGACCAAGTTAAGAAACCCCGAGAGCAAGTTGCTGATGCCGAAGCTCTTCTCGATCTCACACGCTCTTTGCTTGGATCCGTTAAGTCTCTGGTCAACGAAGGAGTCACTCCTTCTCAGTTTGTTTCATCTCTTCTCAAACATTATGCACACCCACCCAACGATTCTATTGACTGGCAAAAACTCGGCATTTCTGTTTCTCCCATTTTCCTCACGGTTCATGGCTCTTCTACCATGCTTGGTCCCATGGAAAATCAGTTGAAACAGCGCAAAACGGCAGTGCCTAGAAAGCGTGCTGCTCTTCCTTCAACTATAACTGCTAGGCCTGAACAGCTTGATGAGACTGAGGGAGGGGAAAAAACTGATACTGACAAAAACATGTCAATCATGTTTGACATATTAAGGAATAAGAAAAAGGTCCAACTTGAACACATGATTTTGAACAGAGTTTCTTTTGCTCAGACAGTGGAAAACTTGTTTGCCCTCTCATTCTTAGTCAAAGATGGTCGTGCTGAAATCAGTATGGATGATAAGCGTTTACACTATGTTTCACCTAAAAATGCTCCTGCTGCCAATTCTGTAATGTCAAAAGAAGTTACTTATACTCATTTTGTCTTCAGATATGATTACAACGATTGGAAGATAATGAAGGATATTGTGCCTGATGGCAAAGAGCTAATGCCACATAGGGGTCAATACAGCACTGTGGCTAACCCTGAGGCAGAGATGAAAGCTGACCATTCCCCACCAGCTTTGGCTGTGACTCCTATCAGGAAGCTATCCCGGAACCGAGGGCGGGTTCTGCAGGAGGAAAGCATTGTGGAAGAAACTCCTGATTGTGACAAGGAAACTACTTCTAGAGCTGCTGCAATCCGAAGGTGTAAACGTAAAATCTATTAA 1146 0.4258 MVRKDNNNEEEEEEEEEQVSRRVKRERLSENNAASDHQDTTSRRIIRSEFLKLKSIINEKKDDLINSDSDKFESILNEFDKLHDQVKKPREQVADAEALLDLTRSLLGSVKSLVNEGVTPSQFVSSLLKHYAHPPNDSIDWQKLGISVSPIFLTVHGSSTMLGPMENQLKQRKTAVPRKRAALPSTITARPEQLDETEGGEKTDTDKNMSIMFDILRNKKKVQLEHMILNRVSFAQTVENLFALSFLVKDGRAEISMDDKRLHYVSPKNAPAANSVMSKEVTYTHFVFRYDYNDWKIMKDIVPDGKELMPHRGQYSTVANPEAEMKADHSPPALAVTPIRKLSRNRGRVLQEESIVEETPDCDKETTSRAAAIRRCKRKIY 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01790 381 Coils Coil 2 26 - -
Car04g01790 381 PANTHER UNCHARACTERIZED 12 364 IPR027786 GO:0005634|GO:0006281|GO:0030915
Car04g01790 381 MobiDBLite consensus disorder prediction 1 41 - -
Car04g01790 381 MobiDBLite consensus disorder prediction 17 33 - -
Car04g01790 381 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 12 364 - -
Car04g01790 381 Pfam Nse4 C-terminal 222 302 IPR014854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01790 Car-Chr4 18897077 18899607 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01790 12 380 Non-SMC Element family AT1G51130 47.826 1.78e-117 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01790 K22825 - gmx:100792117 471.47