Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01789 ATGGAATATTATGGGGTTGTGGGTTTGGTATTAGCCGGTTTGGCATGGATGTGGTTGGGAAATAAAAGATTGAAATTTGGTAATAAGCTTCCACCTGCTCCAACATGTTGGCCAATTGTTGGAAACATTTTGCAGCTAGCAAGGTTGTCATCATCACCACCACATGAATCATTTGCAATACTTGCTCGTAAACACGGTCCAATCATGACCCTTTGGTTAGGTTCCATGTGTACCGTTGTTGTCTCCTCCAGTGAAGTTGCTCGTCAAATGTTCAAAAACAACGATGTTGTTCTTGCTGGTAGGAAGGTTTATGAAGCCATGAAAGGTAATTATGAGAATGGTATTATTGAAGGTTCTCTCATTACTTCTCAATACAACTCACACTGGCGCATGTTGAAACGATTGGCTACTCATGAGTTCTTTGTCACTAGTCGCTTAGATGCTATGCGAGATGTGCGTGCAAAATGCGTAGATCGAATGTTGAATTTGATCGAACATGAATCTGTTAATTCTGTTGGTGTTGGTGTTGATGTTGGTAATTTTCTTTTCACAATGTCTTTTAACCTCATTGGGAACCTTATTTTTTCAAAGGATTTGTTAGGGCCTGGAATGGAAATGGAAAGAGGAGGTAGATTCCATTACCATACTGTTAAGATAATGGAGTATACTGGTAAACCAAATGTAGCTGATTATTTCCCAATGTTGAGGTGGCTTGATCCACAAGGTTTAAGGAGAAACACAAAGTTTCATGTTGAAGAAGCGTTTGAGATAGCAGGATGGTTCATCAAACAAAGAATGAAAGGTAGCAGTGATGGAAACACCAAAGACTTTTTGGATGTGCTGTTGCAGTTTCGCGGAGATGCTGCCACTGGGCCCTACCACTTTACTTCCAAAACTATTAACGTCGTTGTCTTGGAAATGTTCACTGCAGGGACAGACACGACAACAAGCACAATAGAATGGGCAATGGCTGAGCTTCTGCACAGTCCAAGAACGCTAAAGAAAGTGCAAATGGAACTAAGGAGCAAAATAGGGAAAATTGAAGAAAATGACATTGAAAATCTTCCCTACCTCAAAGCAGTTATCAAGGAGACTTTGAGACTTCACCCACCGCTTCCTTTTTTGGTTCCTCACAAGGCCATGGACTCTTGCAACATTCAAGAATACTACATTCCCAAAGAGACACAAATTTTAGTGAATGTTTGGGCGATTGGGAGGGACCCCAAAGTGTGGGATGATCCCTTATTGTTCTTGCCAGAAAGGTTTATGGAGCCAAACATGGTAGATTACAAGGGACAGCATTTTGAGTTTATACCTTTTGGTTCTGGTCGAAGAATGTGCCCGGCAATGCCACTTGTCTCTCGTGTGCTTCCAATGGCACTAGGCTCCCTTCTCAAATACTTTGATTGGATATTGCCTGATGGCATTAAGCCAGAGGAGATGGACATGACAGAGGGAACTGGAATAACACTGAGAAAAGCCATTCCTTTGAAAGCCATACCTGTGCCTTACACAGGAACTCCTGTCCCAGTTGCAGATGCAGGGAAATAA 1551 0.4197 MEYYGVVGLVLAGLAWMWLGNKRLKFGNKLPPAPTCWPIVGNILQLARLSSSPPHESFAILARKHGPIMTLWLGSMCTVVVSSSEVARQMFKNNDVVLAGRKVYEAMKGNYENGIIEGSLITSQYNSHWRMLKRLATHEFFVTSRLDAMRDVRAKCVDRMLNLIEHESVNSVGVGVDVGNFLFTMSFNLIGNLIFSKDLLGPGMEMERGGRFHYHTVKIMEYTGKPNVADYFPMLRWLDPQGLRRNTKFHVEEAFEIAGWFIKQRMKGSSDGNTKDFLDVLLQFRGDAATGPYHFTSKTINVVVLEMFTAGTDTTTSTIEWAMAELLHSPRTLKKVQMELRSKIGKIEENDIENLPYLKAVIKETLRLHPPLPFLVPHKAMDSCNIQEYYIPKETQILVNVWAIGRDPKVWDDPLLFLPERFMEPNMVDYKGQHFEFIPFGSGRRMCPAMPLVSRVLPMALGSLLKYFDWILPDGIKPEEMDMTEGTGITLRKAIPLKAIPVPYTGTPVPVADAGK 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01789 516 Gene3D Cytochrome P450 24 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01789 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Car04g01789 516 SUPERFAMILY Cytochrome P450 31 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01789 516 Pfam Cytochrome P450 31 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01789 516 PANTHER CYTOCHROME P450 76A1-LIKE 7 507 - -
Car04g01789 516 PANTHER CYTOCHROME P450 FAMILY 1 7 507 - -
Car04g01789 516 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01789 516 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01789 516 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01789 516 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01789 516 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01789 516 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01789 516 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01789 516 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01789 516 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car04g01789 516 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01789 Car-Chr4 18893114 18896643 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01789 28 507 Cytochrome P450 AT3G52970 60.990 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01789 - - lja:Lj5g3v2300360.1 725.702