Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01762 ATGGTATCGGCTACAATTAGGCGAATTGTGTCACCCTGTTGGAGGCCGTCTATCGAGGGCGAAAACTCTGGTAGGAATGGAGATGGGAGCGGACGTTCCGATGGTTTGTTGTGGTATAAAGATTCTGGAAGACACGCGAATGGCGAATTCTCAATGGCTGTTGTTCAAGCAAACAATTTGTTGGAGGATCAAAGCCAACTTGAATCGGGCCCCTTGAGTTCAATTGAAGGAAGTCCTCGAGGAACTTTCGTTGGTGTATACGATGGGCATGGAGGTCCAGAAACTGCCCGGTTCGTCAATGACCACCTATTTAAACATATAAAGAAGTTCACTTCAGAAAATCAGGGAATGTCAGCTGATGTTATCAACAAAGCATTCTTGGCAACAGAAGAAGAATTTCTTGCTCTAGTAAAGAAACAGTGGCTACACAAGCCACAGATAGCATCAGTTGGATCATGCTGTTTGGTAGGCGTAATATACAGCGGGGAGCTCTATATTGCAAATGCAGGAGACTCTCGAGCAGTGTTAGGTAGATTGGACGATGCTACAAAAGAGATTAAAGCGGTTCAACTATCCTACGAGCACAATGCTAGTTTGGAATCTGTCAGAGAGGAGCTGCGCTCATTGCATCCCAATGATCCACAGATCGTAGTTATGAAGCACACGGTCTGGCGCGTGAAGGGTCTGATTCAGATTTCAAGATCCATCGGCGACGCCTATCTAAAGAAAGCAGAGTTTAACCAAGCACCACTTTTGTCAAAATTTCGGCTCTCGGATACCTTTGAAAAGCCAATCCTTAAAGCTGAACCAACAATACAAGTACAGAAACTAGAAGCTAGTGATCAATTTATTATATTTGCATCAGATGGATTATGGGAGCACATGAGCAATCAAGAAGCGGTCGACATTGTCCAGAGTTGTCCACGTAATGGAGTAGCGAAGAAACTGATCAAAACAGCACTTTGCGAAGCTGCAAAGAAAAGAGAAATGAGATACTCGGACTTGAAAAAGATTGACCGTGGCGTAAGGAGACATTTCCATGACGACATAACAGTTATAGTTCTGTATCTTGATTTGCATAATTCACGTGCTCCCGTTGTTTCAATCAAAGGAGGTGGTGATTTTGGTATTGGTATTGTAAATGGGTAG 1149 0.436 MVSATIRRIVSPCWRPSIEGENSGRNGDGSGRSDGLLWYKDSGRHANGEFSMAVVQANNLLEDQSQLESGPLSSIEGSPRGTFVGVYDGHGGPETARFVNDHLFKHIKKFTSENQGMSADVINKAFLATEEEFLALVKKQWLHKPQIASVGSCCLVGVIYSGELYIANAGDSRAVLGRLDDATKEIKAVQLSYEHNASLESVREELRSLHPNDPQIVVMKHTVWRVKGLIQISRSIGDAYLKKAEFNQAPLLSKFRLSDTFEKPILKAEPTIQVQKLEASDQFIIFASDGLWEHMSNQEAVDIVQSCPRNGVAKKLIKTALCEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVLYLDLHNSRAPVVSIKGGGDFGIGIVNG 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01762 382 ProSiteProfiles PPM-type phosphatase domain profile. 49 357 IPR001932 -
Car04g01762 382 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 8 374 - -
Car04g01762 382 SMART PP2C_4 41 355 IPR001932 -
Car04g01762 382 PANTHER ALPHABET, ISOFORM E-RELATED 8 374 - -
Car04g01762 382 Pfam Protein phosphatase 2C 72 328 IPR001932 -
Car04g01762 382 CDD PP2Cc 50 357 IPR001932 -
Car04g01762 382 SUPERFAMILY PP2C-like 78 358 IPR036457 -
Car04g01762 382 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
Car04g01762 382 Gene3D - 39 363 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01762 Car-Chr4 18462969 18465349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01762 3 376 PP2C-type Phosphatase Gene Family AT3G12620 74.737 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01762 K01102 - gmx:100807559 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01762 04 18462969 18465349 Car04g01762 04 18462969 18465349 ECH