Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01759 ATGCCTCAGCTTCGTAGTGGAGTTCGACGCGCTCGTGTTGCCGCCGTAGCTCAGAAAGAATCCAAACCACCGAAGAAAAACGTGGCGGCGAGGGGGAGACCCAGAACTAGATTGGCGGCGAAGAAATCGGAGCGTGAGAATCCGTTGAAACAGTTATTGAATCCTCCTCCTGATACTTACGTTGAACCACCACCACCGACGGTGAACGTTATAGAACAAGGCGTGGCTGCGATGGTTGATGAAAGAGGTGGTGGATTGAGTGCTAATAAGGACAAGGCTGTTGCCGTTGCTCCAGAGGAAGATGCCAACACTCCACCTCTTCCTGATAAGGTTCAAGTAGGAGGATCGCCTCTTTACAAGGTAGAGAGGAAACTTGGTAAAGGTGGATTTGGTCAGGTTTTTGTTGGCCGTCGCGAGCGAGCGAATGCTCCTGGAGCTATTGAGGTTGCTCTGAAATTTGAACATAGAAACAGTAAAGGTTGCAGCTATGGCCCTCCTTATGAGTGGCAAGTATACAACACCCTTGGTGGTAGTCATGGAATACCTAAAGTACACTATAAAGGAAGACAAGGAGAGTATTATGTGATGGTTATGGACATTCTTGGTCCAAGTTTGTGGGATGTATGGAATACCTCAGGCCAATCGATGTCTCCTGAAATGGTCTCGTGTATAGCTGTTGAGTCCTTATCGATACTAGAGAAGTTGCACGCAAAAGGTTATGTACATGGAGATGTAAAACCAGAAAACTTTTTACTAGGTCAACCCAGCACAGCACAGGAGAAGAAGTTGTTTCTTGTTGACCTTGGATTAGCAACAAAGTGGAAAGATTCCTCAAGTGGAAAGCATACTGAATATGATCAACGCCCTGACATGTTTAGAGGGACTGTTCGATACGCTAGCGTTCATGCCCATTTGGGAAGAACTGCCAGTAGAAGGGATGATCTTGAATCACTTGCATACACACTAATCTTTCTTCACAGGGGCCGATTACCATGGCAAGGTTTTCAGGGTGATGGCAAATCCTTCCTCGTTTGCAAAAAGAAAATGGGAACATCTCCTGAGATGCTGTGCTGCTTTTGCCCCGCTCCCTTTAAGCTATTTCTCGAGACTGTGGTGAACATGAAATTTGACGAAGAACCCAACTATTCGAAGCTAATATCCTTGTTTGATGGTATGCTCGGACCCAATCCTGCGTTGCGACCAATTAATACTGAAGGCGCTCAAAAAGTTGGGCAAAAGCGGGGTAGATTGAATGCTGATGCAGATGATGATTCACAGCCCAAAAAGAAGGTCCGTTCAGGGATTCCTGCTTCACAATGGATTTCAGTTTACAATGCTAGACTACCGATGAAACAAAGGTATCATTACAATGTGGCTGATGGAAGATTAGCACAACATATTGAGAGAGGGATTGCTGATGACCTTCTTATTAGTTGTGTATCATGTTGTTCAAATCTATGGGCACTTATCATGGATGCTGGAACTAATTATTCCGCTCAAGTTTACAAATTGTCGCCATTATTTTTACACAAGGAGTGGATCTTGGAACAATGGGATAAGAACTACTACATCACTTCCGTTGCAGGGGCCAGTAATGGCAGCTCTGTTGTGGTCATGTCAAAAGGTACGCGGTATACGCAACAATCATACAAAGTAAGTGAATCTTTCCCCTACAAATGGATAAACAAGAAGTGGAAAGAAGGTTTTCATGTCACCTCAATGGGTACTGCTGGAAGTCGCTGGGGTATAGTTATGTCTCGCAATGCTGGATTCAGTGATCAGGTGGTGGAACTTGATTTTCTCTATCCAAGTGAAGGCATCCATAAACGTTGGGATAATGGTTATAGGATTACAGCAACTGCAGCTACATTGGATCAATCTGCGCTTATATTAAGTATCCCGAGGAACAGGCCTGGTGATGAAACTCAGGAAACTCTGCGTACATCTCAATTTCCCAGCGCTCATGTTAAGGAAAAATGGTCAAAAAACCTTTATCTTGCCCATTTGTGCTATGGGCGCACAGTAGGCTGA 2031 0.4471 MPQLRSGVRRARVAAVAQKESKPPKKNVAARGRPRTRLAAKKSERENPLKQLLNPPPDTYVEPPPPTVNVIEQGVAAMVDERGGGLSANKDKAVAVAPEEDANTPPLPDKVQVGGSPLYKVERKLGKGGFGQVFVGRRERANAPGAIEVALKFEHRNSKGCSYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDILGPSLWDVWNTSGQSMSPEMVSCIAVESLSILEKLHAKGYVHGDVKPENFLLGQPSTAQEKKLFLVDLGLATKWKDSSSGKHTEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHRGRLPWQGFQGDGKSFLVCKKKMGTSPEMLCCFCPAPFKLFLETVVNMKFDEEPNYSKLISLFDGMLGPNPALRPINTEGAQKVGQKRGRLNADADDDSQPKKKVRSGIPASQWISVYNARLPMKQRYHYNVADGRLAQHIERGIADDLLISCVSCCSNLWALIMDAGTNYSAQVYKLSPLFLHKEWILEQWDKNYYITSVAGASNGSSVVVMSKGTRYTQQSYKVSESFPYKWINKKWKEGFHVTSMGTAGSRWGIVMSRNAGFSDQVVELDFLYPSEGIHKRWDNGYRITATAATLDQSALILSIPRNRPGDETQETLRTSQFPSAHVKEKWSKNLYLAHLCYGRTVG 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01759 676 ProSitePatterns Protein kinases ATP-binding region signature. 125 152 IPR017441 GO:0005524
Car04g01759 676 SMART serkin_6 119 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01759 676 Gene3D Transferase(Phosphotransferase) domain 1 88 434 - -
Car04g01759 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Car04g01759 676 MobiDBLite consensus disorder prediction 415 430 - -
Car04g01759 676 Pfam Protein kinase domain 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01759 676 ProSiteProfiles Protein kinase domain profile. 119 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01759 676 PANTHER CASEIN KINASE-RELATED 69 650 - -
Car04g01759 676 PANTHER CASEIN KINASE I-LIKE PROTEIN 69 650 - -
Car04g01759 676 MobiDBLite consensus disorder prediction 403 431 - -
Car04g01759 676 MobiDBLite consensus disorder prediction 1 66 - -
Car04g01759 676 SUPERFAMILY Protein kinase-like (PK-like) 119 397 IPR011009 -
Car04g01759 676 CDD STKc_CK1 119 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01759 Car-Chr4 18440828 18445933 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01759 118 272 EF-hand Containing Proteins AT4G21940 27.848 2.78e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Car04g01759 Pkinase 2.4e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01759 - - gmx:100819969 1105.51