Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01737 ATGATCTCAGACACCGACTGCGTGAAACATGCCACCGCGGCCCCTGCCGTCGCCGGTGAAAAAACTTCCGCTTCATCCGATAAAGATCACCGCGCACCGCCGGCAGCTCCAAACATTGTGATGTCCTCTAAAGATCACGATTCTCTCTTCAGCGGTGGCGGCATCAGCTTTCTATCTGGAAGTCGAAATGGAAGGATCAACTATGGATATTCCAGTTTCAAGGGTAAAAGATCTTCAATGGAGGATTTCTTTGAGACCAAAATATCAGAGGTTGATGGTCAAATGGTTGCCTTTTTTGGTGTTTTTGATGGCCATGGAGGTTCGCGGACTGCAGAATACCTGAAAAATAATCTATTCAAGAATTTGAGTAACCATCCTGGCTTTATCAAAGACACAAAGACGGCTATTTTTGAAGCATTTAAACAAACAGATGTCGATTACCTCAATGAGGAAAAGGGGCATCAAAGGGATGCTGGGTCCACTGCATCGACAGCGGTGTTGTTGGGCGACCGAATTCTTGTTGCAAATGTTGGTGATTCCCGAGTAGTTGCATCTAGAGCTGGTTTAGCTGTTCCTTTATCTGTTGATCACAAACCTGATAGATCTGATGAGCGTCAAAGGATTGAACAGGCTGGGGGATTCATAATATGGGCAGGAACATGGAGGGTTGGTGGTGTTCTTGCTGTTTCCCGTGCATTTGGAGACAAACTTCTTAAGCCATATGTTGTTGCTGACCCAGAAATTCAGGAGGAAGAAATTGAAGGCGTGGATTTTATAATAATTGCTAGTGATGGTCTTTGGAATGTTATATCAAACAAGGAAGCCGTGTCTTTAGTACAAACTATCACTGATGCAGAAGTGGCATCTAGAGAACTTATTAAAGAAGCTTATACCCGAGGAAGCTCAGACAACATCACTTGTGTTGTTGTTCGATTTGATCCATCCTGA 948 0.4409 MISDTDCVKHATAAPAVAGEKTSASSDKDHRAPPAAPNIVMSSKDHDSLFSGGGISFLSGSRNGRINYGYSSFKGKRSSMEDFFETKISEVDGQMVAFFGVFDGHGGSRTAEYLKNNLFKNLSNHPGFIKDTKTAIFEAFKQTDVDYLNEEKGHQRDAGSTASTAVLLGDRILVANVGDSRVVASRAGLAVPLSVDHKPDRSDERQRIEQAGGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIEGVDFIIIASDGLWNVISNKEAVSLVQTITDAEVASRELIKEAYTRGSSDNITCVVVRFDPS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01737 315 MobiDBLite consensus disorder prediction 16 37 - -
Car04g01737 315 ProSitePatterns PPM-type phosphatase domain signature. 98 106 IPR000222 GO:0043169
Car04g01737 315 PANTHER PROTEIN PHOSPHATASE 2C 11-RELATED 33 314 - -
Car04g01737 315 PANTHER ALPHABET, ISOFORM E-RELATED 33 314 - -
Car04g01737 315 ProSiteProfiles PPM-type phosphatase domain profile. 67 312 IPR001932 -
Car04g01737 315 CDD PP2Cc 66 312 IPR001932 -
Car04g01737 315 Pfam Protein phosphatase 2C 68 305 IPR001932 -
Car04g01737 315 SUPERFAMILY PP2C-like 60 313 IPR036457 -
Car04g01737 315 Gene3D - 60 315 IPR036457 -
Car04g01737 315 SMART PP2C_4 56 310 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01737 Car-Chr4 17913563 17919549 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01737 39 315 PP2C-type Phosphatase Gene Family AT1G43900 72.202 1.23e-151 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01737 K17506 - gmx:100776867 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01737 04 17913563 17919549 Car04g01737 04 17913563 17919549 ECH