Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01723 ATGATGGTTTCGAGGGGGCTTTTCGGGTGGTCCCCACCTCACGTGCAACCTCTAACGCCGGTATCTGAGGTTTCTGAGCCGCCGGAGTCGCCGTCGCCGTACTTGGATTTCGGAGCAGAGACCTCCGCGTCGCagcaggtggaggcggaggaggagatggaagagatggaggaTATTGAGCCGCCACCAGCCGCCGTTCCTTTCTCCCGTCTCTTCGCATGTGCTGACCGATTGGACTGGTTTCTCATGGTAGTTGGCTCCGTCGCCGCCGCTGCTCACGGCACTGCTCTTGTTGTTTACTTGCACTACTTTGCCAAAGTTATTCAGGTTCCTCAGCAGCAGGATCAGTTTCATAGGTTCAAGGAGCTTGCTTTGACCATGGTTTATATTGCTGGTGGTGTTTTTGTTGCTGGTTGGATTGGTAAGCTAATAATGAATAATGCATCTTTATTAGATGTTGGACCTAAGTTTACTGCAGTACTGATTTTTCTTTCTTTTTCGATAGAGGTTTCATGTTGGATTCTTACCGGAGAACGGCAGACAGCTGTTATCAGATCAAAATATGTTCGGGTATTACTTAACCAAGATATGAGTTTCTTTGACACTTATGGGAATAATGGAGACATTGTGAGTCAAGTATTGAGTGATGTACTGCTCATTCAGTCTGCTCTCAGTGAAAAGGTTGGGAATTATATTCATAATATGGCTACATTCATCAGTGGTCTTGTTATTGCTTTTGTCAATTGTTGGCAGATTGCATTGATAACATTAGCTACAGGTCCATTTATTGTTGCTGCTGGAGGAATATCAAATATATTCCTTCATAGGCTTGCAGAGAATATCCAAGATGCATATGCCGAAGCAGCCAGCATTGCTGAACAGGCAGTTTCCTATATACGGACCTTGTGTGCATTTACAAATGAAACATTGGCTAAGTATTCATATGCAACGTCACTTCAAGCTACTCTTAGATATGGTATATTAATAAGTCTTGTTCAAGGGCTTGGTCTTGGATTTACGTATGGGCTTGCAATATGTTCTTGTGCATTACAACTCTGGGTCGGAAGGTTCTTGGTTATACACGGAAAAGCTCACGGTGGGGAAATTGTAACAGCTATGTTTGCGGTGATTCTAAGTGGCTTGGGATTGAACCAAGCGGCAACCAATTTCTACTCTTTTGATCAAGGGCGAATAGCTGCTTATAGACTATTTGAGATGATAAGCCGGTCATCCTCATCCTTTAATCATGACGGAAGTGCTCCCGTGTCTGTGCAAGGAAATATAGAGTTTCGGAACGTTTACTTCAGTTATCTTTCTCGCCCTGAAATCCCTATCTTAAGTGGATTTTATCTCACAGTTCCTGCTAAGAAAACTGTGGCACTTGTTGGCAGAAATGGATCTGGAAAAAGTAGTATTATTCCACTCATGGAGCGGTTTTATGATCCAACATTAGGAGAAGTTCTTTTAGATGGTGAAAACATCAAGAATTTGAAACTGGAATGGTTGAGGAGCCAAATAGGACTGGTCACCCAGGAACCTGCTTTGCTCAGTTTGAGTATAAGAGACAACATTGCATATGGGAGGGATACCACCATGGATCAAATTGAAGAGGCTGCTAAAATAGCTCATGCACATACCTTTATCAGTTCATTAGATGAAGGATATGATACACAGATTGGCAGGGCTGGTTTAACTTTGACAGAAGAACAGAAAATAAAGCTTTCTATTGCAAGAGCTGTGCTTCTAAATCCATCCATTCTCCTGCTTGATGAGGTTACTGGCGGACTTGATTTTGAGGCCGAGAGGTCTGTTCAGGAAGCTCTTGATCTCCTTATGCTGGGACGCTCAACAATAATAATTGCTCGAAGGCTTAGTCTTATAAAGAATGCTGATTATATAGCAGTTATGGAGGAAGGCCAACTTGTTGAAATGGGTACTCACGATGAACTATTGACCCTGGGTGGCTTATATGCAGAGCTTCTTCGATGTGAAGAGGCTACTAAACTTCCAAAGAGGATGCCTGCTCGCAACTACAAGAAGACTGCAGCTTTCCAAATTGAGAAAGATTCTTCAGAAAGTCATAGCTGCAAAGAACCATCCTCTCCTAGAATGATGAAGTCACCCTCTCTTCAAAGAATTTCTGCTGTATTTCGGCCTTCGGATGGCTTCTTTAACTTACAAGAATCACCACAAGTTCAGAGTCCACCACCTGAGAAGATGATGGAAAACGGCCAGTCTTTGGATTTAACAGAGAAAGAGCCATCAATAAAAAGGCAGGATAGCTTCGAAATGAGACTACCCAAGTTACCCAAGATTGACGTTCAGTCAGTGCATCGACAGACATCGAATGGTTCTGATCCAGAGTCCCCTGTTTCACCTCTTTTAACATCTGATCCTAAAAATGAACGCTCTCATTCACAAACATTCAGCAGACCAGATAGTTATTCTGATGAATTTTCAATGAAAATGAAGGAAACAAAGGATGCACAGCATCGAGATCAACCCTCATTTTGGAGACTGGCAGAGCTTAGTTTTGCAGAGTGGCTTTATGCTGTGTTAGGAAGCATAGGTGCTGCAATATTTGGTGCGTTCAATCCCCTTCTTGCTTATGTTATTGGCCTGGTGGTGACAACTTACTATAGAATTGATGGAACTCATCATTTGCGGGGGGAGATAGACAAGTGGTGCTTGATCATTGCCTGCATGGGTATTGTGACAGTTGTTGCCAACTTTTTACAGCATTTCTACTTTGGCATAATGGGGGAGAAAATGACTGAAAGAGTTCGGAGAATGATGTTCTCAGCCATGCTACGTAATGAAATTGGATGGTACGATGAAGAGGAAAACAGTGCCGACAATTTATCCATGCGTTTGGCCAATGATGCTACTTTTGTGCGAGCTGCTTTCAGTAACCGACTTTCCATATTTATACAGGACAGTGCTGCAGTTATTGTTGCTTTTCTCATTGGTGTTTTGCTGCACTGGAGAATAGCTCTTGTGGCTTTAGCAACACTTCCGGTTCTCTGTGTTTCTGCTATTGCCCAGAAATTGTGGCTTGCTGGTTTTTCAAGGGGCATACAGGAAATGCACCGAAAGGCATCTTTGGTTCTTGAAGATGCAGTTAGAAATATTTACACTGTTGTTGCATTTTGTGCTGGTAATAAGTTTCTACTTTTTGCTTGTAATGCCCTTCTACTCTGGTACACCGCAATATGTATAAAAAAGAGTTATGTAGATGCACCTACTGCCCTCAAGGAGTACATGGTTTTCTCATTTGCTACATTTGCACTTGTGGAGCCTTTTGGATTGGCTCCTTACATACTCAAGCGACGTAAATCTCTTATTTCAGTGTTTGAAATTATAGATCGTGTGCCTAAAATTGATCCTGATGAAAACTCAGCCTTGAAGCCACCAAATGTATATGGAAGCATTGAGTTGAAAAATGTTGATTTTTGTTATCCTACTCGGCCAGAAGTGTTGGTATTAAGCAATTTCAGTCTCAAAGTCAGTGGGGGGCAAACAATTGCCGTTGTAGGAGTTTCAGGGTCGGGAAAGAGGACTATAATATCTTTGATGGAGAGATATTATGATCCAGTTGCTGGCCAAGTTTTATTGGATGGGAGGGATTTAAAACTATATAATCTGAAATGGCTTAGGAGCCACCTTGTTTTGTCTTACGAGAAAGAAACGTAG 3693 0.4178 MMVSRGLFGWSPPHVQPLTPVSEVSEPPESPSPYLDFGAETSASQQVEAEEEMEEMEDIEPPPAAVPFSRLFACADRLDWFLMVVGSVAAAAHGTALVVYLHYFAKVIQVPQQQDQFHRFKELALTMVYIAGGVFVAGWIGKLIMNNASLLDVGPKFTAVLIFLSFSIEVSCWILTGERQTAVIRSKYVRVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFISGLVIAFVNCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLCAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHGKAHGGEIVTAMFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSFNHDGSAPVSVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDTTMDQIEEAAKIAHAHTFISSLDEGYDTQIGRAGLTLTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERSVQEALDLLMLGRSTIIIARRLSLIKNADYIAVMEEGQLVEMGTHDELLTLGGLYAELLRCEEATKLPKRMPARNYKKTAAFQIEKDSSESHSCKEPSSPRMMKSPSLQRISAVFRPSDGFFNLQESPQVQSPPPEKMMENGQSLDLTEKEPSIKRQDSFEMRLPKLPKIDVQSVHRQTSNGSDPESPVSPLLTSDPKNERSHSQTFSRPDSYSDEFSMKMKETKDAQHRDQPSFWRLAELSFAEWLYAVLGSIGAAIFGAFNPLLAYVIGLVVTTYYRIDGTHHLRGEIDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEIGWYDEEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAFLIGVLLHWRIALVALATLPVLCVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKFLLFACNALLLWYTAICIKKSYVDAPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDENSALKPPNVYGSIELKNVDFCYPTRPEVLVLSNFSLKVSGGQTIAVVGVSGSGKRTIISLMERYYDPVAGQVLLDGRDLKLYNLKWLRSHLVLSYEKET 1230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01723 1230 Coils Coil 274 294 - -
Car04g01723 1230 PANTHER ABC TRANSPORTER B FAMILY 1055 1224 - -
Car04g01723 1230 PANTHER ABC TRANSPORTER B FAMILY 157 1056 - -
Car04g01723 1230 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 428 663 IPR003439 GO:0005524
Car04g01723 1230 MobiDBLite consensus disorder prediction 683 709 - -
Car04g01723 1230 SMART AAA_5 455 634 IPR003593 -
Car04g01723 1230 Gene3D ABC transporter type 1, transmembrane domain 70 675 IPR036640 GO:0005524|GO:0016021
Car04g01723 1230 Pfam ABC transporter 1162 1224 IPR003439 GO:0005524
Car04g01723 1230 SUPERFAMILY ABC transporter transmembrane region 63 403 IPR036640 GO:0005524|GO:0016021
Car04g01723 1230 Gene3D ABC transporter type 1, transmembrane domain 1056 1133 IPR036640 GO:0005524|GO:0016021
Car04g01723 1230 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 403 - -
Car04g01723 1230 MobiDBLite consensus disorder prediction 775 815 - -
Car04g01723 1230 Gene3D - 418 665 IPR027417 -
Car04g01723 1230 Gene3D - 1134 1222 IPR027417 -
Car04g01723 1230 Pfam ABC transporter transmembrane region 158 379 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car04g01723 1230 Pfam ABC transporter transmembrane region 856 1058 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car04g01723 1230 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 419 662 IPR027417 -
Car04g01723 1230 MobiDBLite consensus disorder prediction 725 740 - -
Car04g01723 1230 CDD ABC_6TM_Pgp_ABCB1_D2_like 847 1127 - -
Car04g01723 1230 Pfam ABC transporter 449 593 IPR003439 GO:0005524
Car04g01723 1230 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 84 395 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car04g01723 1230 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 852 1057 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car04g01723 1230 MobiDBLite consensus disorder prediction 751 767 - -
Car04g01723 1230 MobiDBLite consensus disorder prediction 725 817 - -
Car04g01723 1230 MobiDBLite consensus disorder prediction 11 45 - -
Car04g01723 1230 SUPERFAMILY ABC transporter transmembrane region 838 1129 IPR036640 GO:0005524|GO:0016021
Car04g01723 1230 Coils Coil 39 59 - -
Car04g01723 1230 PANTHER ABC TRANSPORTER B FAMILY 19 140 - -
Car04g01723 1230 Gene3D ABC transporter type 1, transmembrane domain 793 1054 IPR036640 GO:0005524|GO:0016021
Car04g01723 1230 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 1055 1224 - -
Car04g01723 1230 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 157 1056 - -
Car04g01723 1230 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 140 - -
Car04g01723 1230 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1133 1223 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01723 Car-Chr4 17774178 17781968 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01723 59 721 Calmodulin-binding Proteins AT2G36910 41.888 4.10e-160 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01723 K05658 - gmx:100799399 2114.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01723 04 17774178 17781968 Car04g01723 04 17774178 17781968 ECH