Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01712 ATGTGTGAGAGAGAGAGGATGGTGAACATGATGGAATTTCAGAAACAAGTGCAGAATGGGAATGTTGATCCGATGTATGTGAAGGTTATGACTGATGATCAATTGGAAACTCTGAGGAAACAAATTGCTGTTTATGCTACCATTTGTGAACAACTTGTTGAGATGCACAAAACACTCTCAACTCAACACGATCTTGCTGGAGTTAGGCTGGGAAATATATACTGTGACTCATTGATGGCATCTGGTCACAAAATCACATCCAGACAGCGGTGGACTCCTACGCCGGTTCAGCTCCAGATTCTCGAACGTATGTTCGATCAAGGAAACGGAACTCCAAGCAAAGAGAAAATCAAGGAGATTGCTGCTGAATTAGGCCAACATGGCCAAATTTCCGAAACAAATGTTTATAATTGGTTCCAAAATAGGCGTGCTCGATCGAAAAGAAAACTGCAAAATGGAGCACCTAGTAGTAACAATACTGAATCAGAGGTAGAGACTGAGGTTGATTCCAAGGATAAGAAAACAACAAAACCTGAGGAATTTCAGTCTCAACGTAATGTTGTTATAGGAGCTGAAAATGTGAGTTTTCAGAACCCTGAAAAATGCTCTGAGTTGCAGTACTTGAATCCAGATTCTAACAAAACATATTCCATGTTTTCTTCGGATGGAAATGCAAGATCTACTAGAAATTTGGGTGGCAGTGTGTCTGTTTTTGATGAAGTGCTATCAAACTCAAGAAATGACTATCTAGCTGGAAAAATGGAAGTATCTGGGAGTTACAATTTTTACCAGCAAGCAGAAGACTATAATTTGGCAGGTTGA 822 0.399 MCERERMVNMMEFQKQVQNGNVDPMYVKVMTDDQLETLRKQIAVYATICEQLVEMHKTLSTQHDLAGVRLGNIYCDSLMASGHKITSRQRWTPTPVQLQILERMFDQGNGTPSKEKIKEIAAELGQHGQISETNVYNWFQNRRARSKRKLQNGAPSSNNTESEVETEVDSKDKKTTKPEEFQSQRNVVIGAENVSFQNPEKCSELQYLNPDSNKTYSMFSSDGNARSTRNLGGSVSVFDEVLSNSRNDYLAGKMEVSGSYNFYQQAEDYNLAG 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01712 273 CDD homeodomain 88 149 IPR001356 GO:0003677
Car04g01712 273 Gene3D - 90 154 - -
Car04g01712 273 SUPERFAMILY Homeodomain-like 87 150 IPR009057 -
Car04g01712 273 SMART HOX_1 86 153 IPR001356 GO:0003677
Car04g01712 273 MobiDBLite consensus disorder prediction 164 180 - -
Car04g01712 273 Pfam Homeodomain 88 148 IPR001356 GO:0003677
Car04g01712 273 ProSiteProfiles 'Homeobox' domain profile. 84 149 IPR001356 GO:0003677
Car04g01712 273 PANTHER WUSCHEL-RELATED HOMEOBOX 13 9 272 IPR044559 GO:0003700
Car04g01712 273 PANTHER - 9 272 - -
Car04g01712 273 MobiDBLite consensus disorder prediction 146 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01712 Car-Chr4 17721813 17724465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01712 25 273 Wox Gene Family AT4G35550 51.311 4.56e-82 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Car04g01712 Homeodomain 8.9e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01712 - - gmx:100815539 379.022