Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01663 ATGCAATCTATTAGAAAATCATTCAAATCTTATGCTTCTTATAACAAACATTCTAGAAGGTTTTCCGCTACCGGAAATCCAGATTCCGATCACGAACAACTCCCTATTCTCCTCGATCACGAAAACAACCACCGCGTCACTCAGTCTTTGCCGATGGCCGGAGATGTCGTCGTTAAGATCGACGACGAGGTTGAACCTGTTCAAGGGAACAAGATTTGGAGAGAGTCTAGCTACGATTTCTGGAATGATACCGGCGACAATGCGCGCGAAGAGAGCTTTGATTTCCGCAACAAAGGTCACCAACCGGAGGACCCGCCGTCGCAGCTAATTGGAAAGTTTCTGCATAAACAGAGAGCTTCCGGCGAGATGTCGCTTGATATGGATTTGGAAATGGAGGAGCTTCAGAACGAACGTGACGGCGACGGAAAATTAACGCCGGTGGAGGAATCTCCGACGATTATACAACGCGAGCTTAAGGTTTCGTTTGAAGAACCAGCTTCTAGTGTAATCGATGCGGTTAACGATCCTTTTCGGAGAAGACACAGCAAGGAATCGCCGTCGTTAGCTGAGTTTCAGAGACCTCCTCAACCGCCGCATAATGACCGTCGTCGGTCTCCGTCACCGGCAGGTAACGGTGGTGATTGCGAGGTCGTGAGGTGTACCTCTAACGCTTCGTTCGAAAGGAATCTTTCCATGCAGAGAAAATCTACGTTGTTGAAAACCAAAACTAGGTCTAGATTGATGGACCCGCCCGACGAACCCGACAGAAAGTCGGGCCGGGTCATGAAATCGGGTCAGTTATTTTCTGGGATGCTCGGAAAGAAAGTTGATGAAGATGAAGATGATCCTTTTTTGGAAGAGGATTTTCCAGATGAGTATAAGAAAACCCATTTTAGCCTTTGGACTCTTCTTGAGTGGTTGAGTTTGATTTTGATCATTGGTGCATTAGTAACAACTTTGAGTGTTCCTAATTTGAGGGAGAAGAATCTTTGGCAGCTCAAGTTGTGGAAATGGGAGGTAATGATTCTTGTTCTAATCTGTGGTAGGTTGGTTTCTGATTGGGTTATTAGGATTGCTGTTTTTTGCATTGAGAGGAATTTCCTATTAAGGAAAAGGGTTCTTTATTTTGTGTATGGTGTGAGGAAAGCTGTGCAAAATTGTGTTTGGTTGGGTCTTGTTTTGATTGCATGGCATTTTTTGTTTGATAAGAGAGTTCAAAGGGAGACAAAAAGTGATTTCCTTCAATATGTAACTAAGGTTTTGGTCTGTTTCTTGGTGGGTACTTTGGTCTGGTTGTTGAAAACTCTAGTGGTTAAGGTTTTAGCTTCTTCTTTTCATGTCAGCACTTACTTTGATAGGATTCAAGAGTCACTGTTTAATCAATTCGTGATTGAAACACTTTCCGGGCCACCTCTGGTGGAAATTCGGAAGGCCGAAGAGGAGGAAGAAAGGCTTGCTGATGAGGTTCAGAAGTTGCAGAATGCCGGTGTTACCATACCGCCTGATCTTAGAGCTACCGCGTTTCCTAACATCAAGAGTGGAAGGTTGAAGAGTGGCTTGCTTCAGAAAAGCCCTGGATTTAAAAGTGGAAAGTTTTCAATGCCACTTTCCAAGAAGTCTGATGATGGGGTTGGGAATGGTGGTGGTGGGATAACTATTGATCATTTGCATAAGCTGAATCATAACAATGTATCTGCTTGGAATATGAAGAGGTTAATGAATATGGTTCGGCATGGGTCGCTTACTACATTGGATGAGCAGATAATTGATTCCACTGCTGATGATGAGAGTGCCACACAAATCAGAAGTGAAAATGAGGCTAAAGCAGCCGCTAAGAAAATCTTTCAGAATGTTGCTAGGCGTGGCTGCAGGTATATATACCCCGAGGACTTAATGCGTTTTATGAGAGAAGATGAAGCTATAAAAACCATAAATCTCTTTGAAGGAGCGTCCGATACTGGGAAAATCAGCAAATCTGCCTTGAAGAACTGGGTGGTGAATGCCTTCAGGGAGAGGAGAGCACTTGCTTTGACATTGAATGACACCAAAACGGCTGTCAACAAACTTCATCGAATGCTCAATTTTTTAGTTGCCATTATCATACTGGTTATTTGGCTCTTGATATTGGAAATTGCCACCACCAAATTTCTTCTCTTTGTCAGCTCACAGCTTGTCTTGGTTGCATTTATATTTGGAAACACCTGCAAGACTGTATTTGAAGCAATTATATTCTTATTTGTAATGCATCCATTTGATGTGGGTGATAGATGTGAAATTGATGCGACCCAGATGGTTGTAGAAGAAATGAATATATTGACAACCGTATTTCTGAGATTCGATAATCAAAAGATTGTGATCCCTAACAGTGTCCTTGCTACTAAGGCCATACATAATTTCTACCGCAGTCCCGACATGGGAGATGCTCTAGAATTCTGTATTCATGTAGCTACCCCAGTTGAAAAGATTTCACTTATGAAACACAGAATACATAGTTACATTGATAACAAGAAGGAGCACTGGTATCCTTCACCTTTCATAGTCTTGAAGGATCATGAACAATTGAACATGGTGAGAGTGGCGGTCTGGCCGACTCATAGAATGAACTTCCAAGACATGGGAGAAAGATTTGTCAGGAGGTCCGCTCTGATTGAAGAGTTGATGAAGATTTTCAGGGATCTTGACATTCAATACCGTCTCATGCCTCTCGACGTCAACGTTAGAGCTGTGCCTACCACTTCTGATCGTCTTCCACCTAGTTGGTCGACAATCACAGGCTGA 2778 0.4302 MQSIRKSFKSYASYNKHSRRFSATGNPDSDHEQLPILLDHENNHRVTQSLPMAGDVVVKIDDEVEPVQGNKIWRESSYDFWNDTGDNAREESFDFRNKGHQPEDPPSQLIGKFLHKQRASGEMSLDMDLEMEELQNERDGDGKLTPVEESPTIIQRELKVSFEEPASSVIDAVNDPFRRRHSKESPSLAEFQRPPQPPHNDRRRSPSPAGNGGDCEVVRCTSNASFERNLSMQRKSTLLKTKTRSRLMDPPDEPDRKSGRVMKSGQLFSGMLGKKVDEDEDDPFLEEDFPDEYKKTHFSLWTLLEWLSLILIIGALVTTLSVPNLREKNLWQLKLWKWEVMILVLICGRLVSDWVIRIAVFCIERNFLLRKRVLYFVYGVRKAVQNCVWLGLVLIAWHFLFDKRVQRETKSDFLQYVTKVLVCFLVGTLVWLLKTLVVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEIRKAEEEEERLADEVQKLQNAGVTIPPDLRATAFPNIKSGRLKSGLLQKSPGFKSGKFSMPLSKKSDDGVGNGGGGITIDHLHKLNHNNVSAWNMKRLMNMVRHGSLTTLDEQIIDSTADDESATQIRSENEAKAAAKKIFQNVARRGCRYIYPEDLMRFMREDEAIKTINLFEGASDTGKISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFLVAIIILVIWLLILEIATTKFLLFVSSQLVLVAFIFGNTCKTVFEAIIFLFVMHPFDVGDRCEIDATQMVVEEMNILTTVFLRFDNQKIVIPNSVLATKAIHNFYRSPDMGDALEFCIHVATPVEKISLMKHRIHSYIDNKKEHWYPSPFIVLKDHEQLNMVRVAVWPTHRMNFQDMGERFVRRSALIEELMKIFRDLDIQYRLMPLDVNVRAVPTTSDRLPPSWSTITG 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01663 925 MobiDBLite consensus disorder prediction 172 216 - -
Car04g01663 925 Gene3D - 750 799 IPR023408 -
Car04g01663 925 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 2 914 IPR016688 -
Car04g01663 925 MobiDBLite consensus disorder prediction 245 260 - -
Car04g01663 925 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2 914 - -
Car04g01663 925 Pfam Mechanosensitive ion channel 692 895 IPR006685 GO:0016020|GO:0055085
Car04g01663 925 MobiDBLite consensus disorder prediction 231 260 - -
Car04g01663 925 SUPERFAMILY Sm-like ribonucleoproteins 740 799 IPR010920 -
Car04g01663 925 Coils Coil 475 495 - -
Car04g01663 925 PIRSF Memb_At2g17000 30 925 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01663 Car-Chr4 17176784 17182443 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01663 55 922 Mechanosensitive Ion Channel Family AT1G78610 58.579 0.0 958
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01663 K22048 - gmx:102665658 1411.74