Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01650 ATGTTATCGGAGTTAGTGAGATTTTTGAAGGCCTGCTTTCGGCCGAGTTCGGACAAATATGTACATGCGGGGCCAGACGCTGGAGGTAGACAGGATGGACTATTATGGTACAAAGACTCGGGGCAGCATATGTGTGGCGAATTTTCGATGGCGGTAGTCCAAGCAAACAACTTGCTAGAGGATCAGAGCCAGATTGAATCGGGGAGTTTGAGCTTGAATGAGTCTGGCCCTTATGGAACTTTTGTTGGTGTCTATGATGGGCATGGAGGGCCTGAGACGTCACGGTTTGTCAACAATCACCTTTTTCACAATCTCAAGAGATTTACTTCTGAGCAACAATCGATGTCAGTGGATGTAATTCGCAAGGCATTTGAAGCAACAGAAGAGGGGTTTATGTCACTGGTTTCGAGACTGTGGCCAATTTCACCGCAAATTGCAGCAGTTGGTTCATGCTGTCTTGTTGGTATTATTTGTAATGGAACCCTTTATATAGCAAATCTTGGTGATTCCAGGGCTGTTTTGGGAAGAGTGGTCAAGGCAACTGGTGAGGTCTTAGCCATGCAATTATCAACAGAGCACAATGCATCAATAGAGTCCGTAAGACAGGAGCTGCATTCGTTGCACCCCGATGATTCAAATATTGTCGTTTTAAAGCATAATGTATGGCGTGTGAAGGGAATTATTCAAATTTCTAGATCTATTGGTGATGTATATTTGAAAAAAGCCGAGTTTAATAGAGAACCATTGTATGCTAAATTTCGAGTTCATGAGCCGTTGAAGAGGCCAGTACTGAGCTCAGAACCATCCATATTAGTGCATCAATTGCAGCCTCATGACCAATTTATTATTTTCGCATCTGATGGGTTATGGGAGCACTTCAACAATCAAGAAGCAGTTGATATAGTGCAAAACAACCCTCGCTCGGGAATTGCAAAGAGGATGGTGAAAGCAGCACTTCAAGCAGCGGCGGAGAAGAGAGAAATGAGATATTCAGATTTAAATAAAATTGACCGTGGAGTTCGGCGACATTTCCACGATGATATAACTGTGATTGTTGTGTATCTTGACTCAAATCTGATGAGCAGGGCAAGCACTGTGAAGTTCCCTAGTATTTCTATTAGAGGGGGAGGTGTTAATATCCCTCACAACACATTGGCACCTTGTACTACTATACCAACAGATATTGCTGGTACTTGA 1197 0.4319 MLSELVRFLKACFRPSSDKYVHAGPDAGGRQDGLLWYKDSGQHMCGEFSMAVVQANNLLEDQSQIESGSLSLNESGPYGTFVGVYDGHGGPETSRFVNNHLFHNLKRFTSEQQSMSVDVIRKAFEATEEGFMSLVSRLWPISPQIAAVGSCCLVGIICNGTLYIANLGDSRAVLGRVVKATGEVLAMQLSTEHNASIESVRQELHSLHPDDSNIVVLKHNVWRVKGIIQISRSIGDVYLKKAEFNREPLYAKFRVHEPLKRPVLSSEPSILVHQLQPHDQFIIFASDGLWEHFNNQEAVDIVQNNPRSGIAKRMVKAALQAAAEKREMRYSDLNKIDRGVRRHFHDDITVIVVYLDSNLMSRASTVKFPSISIRGGGVNIPHNTLAPCTTIPTDIAGT 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01650 398 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Car04g01650 398 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Car04g01650 398 PANTHER ALPHABET, ISOFORM E-RELATED 5 386 - -
Car04g01650 398 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Car04g01650 398 Gene3D - 36 365 IPR036457 -
Car04g01650 398 CDD PP2Cc 48 355 IPR001932 -
Car04g01650 398 Pfam Protein phosphatase 2C 79 323 IPR001932 -
Car04g01650 398 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 386 - -
Car04g01650 398 SMART PP2C_4 41 353 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01650 Car-Chr4 17050642 17054430 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01650 1 397 PP2C-type Phosphatase Gene Family AT4G38520 72.292 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01650 - K01102 gmx:100790374 688.723