Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01634 ATGGGTATGAGAATGATATTAAAGGGTAAAAGTGAGAATGGGGTATTAGTGTTACAGAGTGATGATGAGGAGGTTGGCGTATGTAGCAGGCTAGAGAGAGAAAGAGAAAGAAAGCAGTCTATGGTCAAAGCGAGGCAGTTGAGAAATTGTAAACACCGATCGATCTACTGTTATGTTAATTGCATTTCTGCCATAGCTGGTTTGGCATATAAATATTTTGGATCCTTAATGTGTGTGATTGGCAATTCCACAAAAGGTACAGCAACCACCATGAGATATATCAGTTGTGGAAGAGAAGGAGCAGTGAGACAATATGTTAGATCGAAGGTTCCTCGTTTAAGATGGACTCCTGAACTCCATCGTTGCTTTGTTAATGCCATTCATACCCTTGGTGGTCATCATAAGGCCACCCCTAAACTTGTTCTTCAGCTTATGGATGTTAAAGGCCTCACTATTTCACATGTCAAGAGCcatcttcagATGTATAGGAGCATGAGAGGTGAATTGGGAAGACAAGGTAGTAGGACAAGCTCACAACAAAGAAACCAATGTCATGAAGAGAATGATGATGGATGTGTTGATGAAGTGAATGTGGAGCAATCTTGTTCAAAACTCATGAGAAGAGAATCTGATTCCCTCATTGGACAAAGTAATAACTTCACAAAAAGGGGTAGAATAGAGAGGAGAAGTTGTAGTGAGCAGCAATGCAGCAATAGAATATGTGATGAAGCAGTTACAAATCCGTACTGTTTTTATGATTATGTACAACAACAGCCCAATACCATGGATGATCAAAACAAAGGAGTTTCTCATACCCCCATTTCCACAACATACCCCCCTCTCCTATCACATTTTGCCAAAAACATCACTTCTTTCAAATCTCATAACCAAGATTCTGATTTCCCTCAGGCTACTAATGTGAATGACAGAAATACCCCGTCAGGGGCAATTAATGGACTTAGGAAAACTGACACAGCACATGTAGAAGTTGAAGGTGTAGGAGGGTATGAGTTGTCATTGTCACTCACATTGCAAAATCCTTCACCTCAGACAAGTAATGCTTCTAACTCGGCAAGTGGAATCAGTGAGACAATCTCATGCTGTCCTAACCCTGATGGGTTTAGCAGCTACAAAGACTGTTATAGAACATCTACTGTGAAAGAAAGGATTAATTTAGACCTATCTTTAGCTATATGTGGCAATTGA 1206 0.3988 MGMRMILKGKSENGVLVLQSDDEEVGVCSRLERERERKQSMVKARQLRNCKHRSIYCYVNCISAIAGLAYKYFGSLMCVIGNSTKGTATTMRYISCGREGAVRQYVRSKVPRLRWTPELHRCFVNAIHTLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGELGRQGSRTSSQQRNQCHEENDDGCVDEVNVEQSCSKLMRRESDSLIGQSNNFTKRGRIERRSCSEQQCSNRICDEAVTNPYCFYDYVQQQPNTMDDQNKGVSHTPISTTYPPLLSHFAKNITSFKSHNQDSDFPQATNVNDRNTPSGAINGLRKTDTAHVEVEGVGGYELSLSLTLQNPSPQTSNASNSASGISETISCCPNPDGFSSYKDCYRTSTVKERINLDLSLAICGN 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01634 401 MobiDBLite consensus disorder prediction 169 189 - -
Car04g01634 401 SUPERFAMILY Homeodomain-like 109 164 IPR009057 -
Car04g01634 401 Pfam Myb-like DNA-binding domain 113 163 IPR001005 -
Car04g01634 401 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 95 401 - -
Car04g01634 401 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 95 401 IPR044848 GO:0003700
Car04g01634 401 Gene3D - 110 166 - -
Car04g01634 401 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 111 164 IPR006447 GO:0003677
Car04g01634 401 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 167 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01634 Car-Chr4 16871533 16876392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01634 96 166 G2-like Transcription Factor Family AT1G14600 73.684 1.63e-31 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car04g01634 Myb_DNA-binding 8.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01634 - - mtr:MTR_1g112370 396.356