Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01616 ATGGACATCTCAAATCCTGCTGTATTTGTCAATGCTCAAGTTCTTCCCAATTTCATTGGAAAGAAAGTAAGAGCAGTGATTCAGGTGAATCGTTCTGATGGTGGTATAATCACAGGAAAATCAACCGATGAATCTCAGATAACTGTAAAAGGGTTATCATCACAAGTCCCTGTCATGAATTATGTTGAGGTTATTGGCATTGCTGAAAGTAGCAACTCTATCCGTGCTGAAATATTGACAGACTTTGGCGCCACATTTGATGCCAACTCTTACAATCAGTTATGTCAACTAGCAAATGGTGAATTCAGAAGTTTGTTTCTTTAG 324 0.3827 MDISNPAVFVNAQVLPNFIGKKVRAVIQVNRSDGGIITGKSTDESQITVKGLSSQVPVMNYVEVIGIAESSNSIRAEILTDFGATFDANSYNQLCQLANGEFRSLFL 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01616 107 Gene3D - 3 107 IPR012340 -
Car04g01616 107 SUPERFAMILY Nucleic acid-binding proteins 6 106 IPR012340 -
Car04g01616 107 CDD RPA3 6 106 - -
Car04g01616 107 PANTHER NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN 1 107 - -
Car04g01616 107 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 107 - -
Car04g01616 107 Pfam Replication factor A protein 3 5 100 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01616 Car-Chr4 16675390 16676888 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01616 1 107 Core DNA Replication Machinery Family AT4G18590 62.617 1.14e-44 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01616 K10740 - gmx:100781484 164.081