Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01614 ATGGGATCTGAAGCTATGGTTTCAGAATGGGCATCGGAGCCTTGCATCATGGGAATTGATGAAGCTGGAAGAGGCCCTGTTCTAGGCCCTATGGTCTATGGTTGTTTATATTGTCCTCGCTCCTACCAGAAAACCCTCTCTTCTTTGAGTTTCGCAGATTCTAAGACATTGAAAGAGGAGAAGAGAGAAGAATTATTTGAAACTTTGAAAGCCAATGATTCTATTGGATGGGCTGTTGATGTCATTGACCCAAAAGAACTCTCTGCTAAAATGCTCAAGAAGAGTAAAATAAACTTGAACGAGATATCACATGACTCTGCCATGGGCCTTGTTGATAGGGTGCTGAAAATGGGAGTGCTTCTAACTGAGGTTTATATTGATACCGTTGGAGATCCAGGGAAATATGAAATGAAGCTGTCTAAAAAATTTCCATCTATCAAATTTGTGGTTGCAAAGAAGGCTGATAGTCTTTATCCTGTTGTCAGTGGTGCAAGCATAGTTGCAAAGGTCACAAGAGATCGAGCTATAAGAGAATGGGTGCTTGATGAGACTGCTGATAACATTGACAGGAACTTTGGCTCTGGATACCCTGGAGATCCCACAACCAAGTCTTGGCTAGAACATCACAAACATTCTATCTTTGGTTTTCCTACATTGGTCAGGTTTAGTTGGGGAACTTGTAGCTCTTATTTTAAAGATGGTGCTGAAGTCTTATGGGAGTCTGACTTGGATGAAGAGGGTGGTAGCAATAGTAATAATAATGGCAAGCGGCAATTGAAATTAAGGAATGTCGGTTTCACCACATCCAAGAGAAGAAGTGAAGAAATAGAATCAAGTGGTAAAGGGCGCTCTAGGTTTTTTCAGGCTAGGAAACTTGAGCACCTCACTAATTTCTGA 897 0.4136 MGSEAMVSEWASEPCIMGIDEAGRGPVLGPMVYGCLYCPRSYQKTLSSLSFADSKTLKEEKREELFETLKANDSIGWAVDVIDPKELSAKMLKKSKINLNEISHDSAMGLVDRVLKMGVLLTEVYIDTVGDPGKYEMKLSKKFPSIKFVVAKKADSLYPVVSGASIVAKVTRDRAIREWVLDETADNIDRNFGSGYPGDPTTKSWLEHHKHSIFGFPTLVRFSWGTCSSYFKDGAEVLWESDLDEEGGSNSNNNGKRQLKLRNVGFTTSKRRSEEIESSGKGRSRFFQARKLEHLTNF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01614 298 PANTHER RIBONUCLEASE 4 297 - -
Car04g01614 298 PANTHER RIBONUCLEASE H2 SUBUNIT A 4 297 IPR001352 GO:0003723|GO:0004523
Car04g01614 298 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 14 236 IPR024567 GO:0004523
Car04g01614 298 Gene3D Ribonuclease hii. Domain 2 187 236 IPR023160 GO:0004523
Car04g01614 298 MobiDBLite consensus disorder prediction 244 264 - -
Car04g01614 298 Pfam Ribonuclease HII 17 227 IPR024567 GO:0004523
Car04g01614 298 Gene3D - 2 186 IPR036397 GO:0003676
Car04g01614 298 TIGRFAM TIGR00729: ribonuclease HII 16 229 IPR004649 GO:0004523|GO:0016070
Car04g01614 298 MobiDBLite consensus disorder prediction 245 264 - -
Car04g01614 298 CDD RNase_HII_eukaryota_like 17 236 - -
Car04g01614 298 SUPERFAMILY Ribonuclease H-like 15 231 IPR012337 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01614 1 298 Core DNA Replication Machinery Family AT2G25100 66.779 3.11e-150 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01614 K10743 - gmx:100779875 514.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01614 04 16665900 16669769 Car04g01614 04 16665900 16669769 ECH