Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01601 ATGGGAAAGAAAATTTTAAAAATGCCTTCACTTTTCAAAACACAAAGAAAACAACAAAATCCATGGCAATTCTTACCTTCTTGTAGCCACCCTAAAACTATTTCTTTTCGAGGTAGTGATGATATATTCAAAACAGTTAATTCTGTTTTTTTTGACCCTTTAGAAAACATTATTGAAACACCAAAATCATGCTTCACAACTTCATCTGAATCTCAATCtgcaagtgcaagtgcaagtgcaagtTTTTCGACTGAATCAGAAGACTATTGTTACATTAATGATGGTGAATCTTTGGAGACATTAGTACGAGGTGTTAAATCAGAGAGATTATTTTTCGAAGCAGAAGATACGAGTTCAATTTTGGAGAAAGCTAAGGCTAATGATTTTCCTTTTAAAGAAAGTGTTGTTTTAGCTATGGAATCAGAGGATCCATATGAAGATTTTAAGAGATCAATGGAAGAAATGGTTGAGTCTCATGGTGTCAAAGATTGGGAAGGTTTGGAGGAACTTTTGAGTTGGTATTTGAGAGTTAATGGTAAAAATAATCATGGCTTTATTGTTGGTGCTTTTGTTGATTTGTTGATTAGTTTAGCAATTTCTAATAATTGTTGTTCTGATTCAACTATGTATTCTTCTGCTGTTTCTTCTTTTGGTTCTTCACCATTGTTGTATTTATCTCAGGGGCAGAGTAATGAGATTACTGAGATTCAAGATAATGTAACAGCTTCTTAG 732 0.3142 MGKKILKMPSLFKTQRKQQNPWQFLPSCSHPKTISFRGSDDIFKTVNSVFFDPLENIIETPKSCFTTSSESQSASASASASFSTESEDYCYINDGESLETLVRGVKSERLFFEAEDTSSILEKAKANDFPFKESVVLAMESEDPYEDFKRSMEEMVESHGVKDWEGLEELLSWYLRVNGKNNHGFIVGAFVDLLISLAISNNCCSDSTMYSSAVSSFGSSPLLYLSQGQSNEITEIQDNVTAS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01601 243 PANTHER TRANSCRIPTION REPRESSOR OFP13 7 222 - -
Car04g01601 243 ProSiteProfiles OVATE domain profile. 137 196 IPR006458 -
Car04g01601 243 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 135 198 IPR006458 -
Car04g01601 243 Pfam Transcriptional repressor, ovate 141 197 IPR006458 -
Car04g01601 243 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 7 222 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01601 Car-Chr4 16511087 16511879 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Car04g01601 Ovate 2.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01601 - - mtr:MTR_1g111640 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02647 03 72263763 72264964 Car04g01601 04 16511087 16511879 ECH
Car04g02056 04 26070690 26071358 Car04g01601 04 16511087 16511879 ECH
Car04g01601 04 16511087 16511879 Car04g01601 04 16511087 16511879 ECH