Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01545 ATGGCGATTACATTCTCTTCTCACATTGTTCTTCTTATACTTTTCCATTTTCTCTTCACTGTTCAATGTTCCATGAGCCCGGATTTCCAAGCTCTTCTATCTTTCAAAACCGCTTCAGACACATCCAAAAAGCTCTCAACTTGGAACACCACCACCgacccatgtacttgggacggagtttcttgcaTCAGAAACCGAGTATCCCGACTCGTTCTTGAAAACCTCGACCTCCAAGGCTCCATAGAACCGTTAACCTCTCTCACTCAGCTCCGAGTTTTGAGTCTCAAAGGAAACCGCTTCTCCGGTCAAGTTCCGAGTCTCTCCAACTTCACTTCCCTGAAACTTCTCTTCTTGTCTCACAACCATTTCACCGGCGAGTTCCCGTCGAATGTGTCGTCTCTTTTCCGACTCAACCGTCTCGATCTGTCAAATAACAACTTCTCCGGTGAGATTCCGGCGACGGTCAACCGTTTGACTCACCTCCTCACTCTCCGTCTCAACGAGAATCAGTTCACCGGCGTCATTCCCGAAATAAACCTTCCCGGTCTTCAAGACTTCAACGTCTCCGGCAACCATCTCTCCGGCGAGATACCGAAAACTCTGTCGGGTTTCTCCGAATCCTCTTTTGGGCGAAACCCATTTCTCTGTGGAGCTCCGTTAGAGAAATGTGAAGCGGAACCTAAGAAACCCGGATCCGAAGGTGCCATTGCTTCACCATTGGTACCAACGGTTTCATCTTcaccaagcacaatgccaacaacaacaacaacaccaaaaaGTAAAAGCCATGAAAAAAGAGCGTCAAAAATGAATCCGGTAGTATTGTTAGCGATTATAGTTGGCGATGTTCTTGTTCTTGGAATAGTGTGCGCTCTTCTTTATTGCTATTTCTGGAAAAACTACTCTTCAAAATCGAAGGAAAGAAAAGGGTTGAAGCTATTCGAAAGCGAAAAGATAGTGTATTCGTCGAGTCCATATCCTGCACAAGGAGGGTTTGAGAGGGGTAAAATGGTATTTTTCGAAGGAGAGAAAAGATTTGAACTTGAAGATTTGCTGCGTGCTTCAGCTGAAATGTTAGGGAAAGGTGGGTTTGGAACGGCTTATAAAGCTGTTCTTGATGATGGAAATGTTGTTGCTGTGAAGAGATTGAAAGATGCACAGATTGCAGGGAAGAGGGAATTTGAACAGCATATGGAAGTTCTTGGAAGGATAAGGCATCCTAATGTTGTTAGTTTGAGAGCTTATTATTTTGCAAGAGAGGAGAAGCTTTTAGTCTATGATTTCATGCCTAATGCCACTTTGTTCTGGCTTCTTCACGGAAACCGAGGCCCAGGACGAAGCCCACTGGACTGGACCACAAGGCTGAAGATAGTAGCTGGAGCGGCACGTGGCGTGGCTTTCATTCACAACTCGTGTAAATCACTTAAATTAACTCACGGTAACATCAAATCAACCAACATTCTCCTTGATAAAGAAGGAAACGCTCGCGTTTCAGATTTTGGGCTTTCAATTTTCACCGGCCCAAGCCCAAATGGAAACAGATCAAACGGTTACCGTGCACCTGAAGCAATAGACGGTAGAAAACAATCACAAAAATCGGACGTGTACTCTTTTGGTGTTCTGTTGCTAGAGGTTCTGACAGGGAAGTGTCCCTCTGCTGTGGACAATGGTGGAAGTGGTTATGGTGGGGGGGTGATGGATCTTCCAAGGTGGGTGCAATCAGTAGTTAGAGAGGAATGGACTGCTGAAGTATTTGATTTAGAGTTGATGAGATATAAAGATATTGAAGAGGAAATGGTGGGTTTGCTTCAGATTGCTATGTCTTGTACTGCTGCTGCACCTGATCAACGGCCAAGGATGTTCCACGTGGTTAAGATGATTGAGGATTTGCGTGGGGTTGAAGTGTCACCTTGTCATGACACGTTGGATTCTGTTTCTGAGTCACCTTCATTGTCTGAAGATGCTTGTGGTGGTACTAGTTAG 1983 0.4352 MAITFSSHIVLLILFHFLFTVQCSMSPDFQALLSFKTASDTSKKLSTWNTTTDPCTWDGVSCIRNRVSRLVLENLDLQGSIEPLTSLTQLRVLSLKGNRFSGQVPSLSNFTSLKLLFLSHNHFTGEFPSNVSSLFRLNRLDLSNNNFSGEIPATVNRLTHLLTLRLNENQFTGVIPEINLPGLQDFNVSGNHLSGEIPKTLSGFSESSFGRNPFLCGAPLEKCEAEPKKPGSEGAIASPLVPTVSSSPSTMPTTTTTPKSKSHEKRASKMNPVVLLAIIVGDVLVLGIVCALLYCYFWKNYSSKSKERKGLKLFESEKIVYSSSPYPAQGGFERGKMVFFEGEKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDAQIAGKREFEQHMEVLGRIRHPNVVSLRAYYFAREEKLLVYDFMPNATLFWLLHGNRGPGRSPLDWTTRLKIVAGAARGVAFIHNSCKSLKLTHGNIKSTNILLDKEGNARVSDFGLSIFTGPSPNGNRSNGYRAPEAIDGRKQSQKSDVYSFGVLLLEVLTGKCPSAVDNGGSGYGGGVMDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQIAMSCTAAAPDQRPRMFHVVKMIEDLRGVEVSPCHDTLDSVSESPSLSEDACGGTS 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01545 660 Gene3D Phosphorylase Kinase; domain 1 333 428 - -
Car04g01545 660 SUPERFAMILY Protein kinase-like (PK-like) 357 627 IPR011009 -
Car04g01545 660 MobiDBLite consensus disorder prediction 641 660 - -
Car04g01545 660 MobiDBLite consensus disorder prediction 239 258 - -
Car04g01545 660 SUPERFAMILY L domain-like 29 221 - -
Car04g01545 660 MobiDBLite consensus disorder prediction 227 265 - -
Car04g01545 660 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 646 - -
Car04g01545 660 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Car04g01545 660 ProSitePatterns Protein kinases ATP-binding region signature. 359 391 IPR017441 GO:0005524
Car04g01545 660 MobiDBLite consensus disorder prediction 639 660 - -
Car04g01545 660 PANTHER - 14 646 - -
Car04g01545 660 Gene3D Ribonuclease Inhibitor 179 227 IPR032675 -
Car04g01545 660 Gene3D Transferase(Phosphotransferase) domain 1 429 643 - -
Car04g01545 660 Gene3D Ribonuclease Inhibitor 26 178 IPR032675 -
Car04g01545 660 Pfam Protein kinase domain 357 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g01545 660 CDD STKc_IRAK 359 630 - -
Car04g01545 660 ProSiteProfiles Protein kinase domain profile. 353 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01545 Car-Chr4 15779681 15782616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01545 28 660 Receptor kinase-like Gene Family AT1G68400 65.794 0.0 820
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car04g01545 Pkinase 3.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01545 - - gmx:100779158 1015.76