Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01525 ATGGAGGcgcaaccgcaaccgccaacgccgtcaactgcaccgcCGTTATCTTCCGTTGCTCCTCCACCACCACACCTCAACTATCCCGATTCAGTCGATTCCTCTCCGCGGTCTCGTAACACAGACTCATGGGACGAACCTTTCCCTCCGGCGTCAACAAAACTCCGTCTCATGTGTAGTTACGGCGGTCACATCGTCCCCCGTCCACATGACAAATCACTTTGCTACGTCGGCGGTGACACTCGAATCGTCGTCGTTGAACGTACAACCTCACTCGCGGAACTCTCCACGCGCCTCTCCAAAACCTTCCTTAATGGAAGAACTTTCACTCTCAAGTATCAACTCCCAAACGAAGACCTGGATTCGTTAATTTCAGTTACAACCGATGAAGACCTAGAAAACATGATCGACGAATACGATCGAACAAACGCTGCTAATCCATCACTCAAACCCTCACGAATTCGTCTTTTTCTATTTCCAACGAAACCTGAATCTGCTCACTCAATTCCACCGCAAATCCTTGATACTTCTGCTAAATCGGACGATTGGTTTCTTGATGCTTTAAACGGCGCCGGTTTGCTTAACAGAGGGTTTTCTGATTCTGCTTCTGTTAACTGTCTTTTAGGTCTTGATGATGATATTGGTGGGAATGGGAATAATAATATTGAACCGGGTTCAAGAGAAGCTCCTGAAGGTGTTTCTCAACCTGGATCTTTTGGGAATTGCAAGAATTTGAAGCAAGATGTTCATTCTGTTCCTGATTCGCCTATGTTGGAGACTACATCGTCTTTTGGTTCGACTTCTTCGTCGCCGTCGTTGGCGAATTTGCCGCCGATTAGGGTGCATGTGGAGGATaatcagAAGGTTTTAGGGATTGAGGAACAGTTTGCTCAAATGGGTGTTGGTGTTGGTGTTAATCAGAAGCAACAGGACGAGGGTTTTGTTGCGATGTCTTCGCCGCCTAATGCTACTGTGCCGCCTACACTTTCTGCGGCGGCGGTTGGTGTTCCGATTGGTTCTGCTGTGGTTGCTGGTGAATATTCGAACAGGGTTTTTTCTGATGATGAGAGATCGGATCATGGAGCGGCTGTTGGATATAGAAAACCACCAACTCCTCAGCCACAGGTTGTTCAACAACCTCCGGTTCAAACTCAACCACAGACGCAGTCACAACCTCCTCAATTTCAACAGAAGTCAAGTAGCGGCGCCGATTTGCCTTCTCCTGATTCAGTTTCTAGTGACAGTAGTCTTTCAAATGCAATGTCGCGTCAAAAACCTGTGATCTATCAAGAACAAGTTCATATTCAATCTGGAACTACAAGGGTTCTTAGCAACCCTGTGGATCCGAAACTCAATTTGTCGGATCCACATGGTAGGATCcaggtgcagcaacatgtacaggaccctggatatttactgcaacagcaattcgaacaccagcaccatcagcaacaattcgaacaccagcagcaacagcaacaacaacagcagcctcaacatcagcctcaacatcagccgcagcagcagttTATACACGGGGGACACTTCATTCACCATAACCCTGCAATTCCTACATACTATCCTGTATATCCCTCACAACAACAACCCCATCACCAGGTGTACTATGTACCTGCAAGACAGCCCCAAGCTTACAATCTTTCTATGCAGCAGGCTAATATGGGTGAATCTGCTACAGCAATCCCTTCTGGCAGACCCCAAAACCCTCCAAACCCCACTACGTTGGTTCAACCAAATGCAGCTTACAATCCCATAAGAAATACTCCCCTACCCAAAACTGAAATGACTGCGGCTGCTTACAGAGCTGCAACTCAAGGCAACCCTCAATTTGTTCAAGTCCCTGCAAGTCAGCATCAGCAACAATATGTCACTTACTCCCAGATCCACCATCCATCCCAATCCATGGCACCCAATTCCACCGCCCCTGCCAATTATGCTTATGAATATGCTGATCCTGCTCATGCTCAAATATACTACTCTCAACCTCTGGCGCCCACAATGCCTTCACAGTACCAGACTATGCAAGGTGCTACAATGATGCAGCCGGAAGTTTCCGCACAGCATCCATCGGACGGCATGAAGCAACAGATAAGAACCACACAGCCTCTATAA 2130 0.4286 MEAQPQPPTPSTAPPLSSVAPPPPHLNYPDSVDSSPRSRNTDSWDEPFPPASTKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVERTTSLAELSTRLSKTFLNGRTFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTNAANPSLKPSRIRLFLFPTKPESAHSIPPQILDTSAKSDDWFLDALNGAGLLNRGFSDSASVNCLLGLDDDIGGNGNNNIEPGSREAPEGVSQPGSFGNCKNLKQDVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHVEDNQKVLGIEEQFAQMGVGVGVNQKQQDEGFVAMSSPPNATVPPTLSAAAVGVPIGSAVVAGEYSNRVFSDDERSDHGAAVGYRKPPTPQPQVVQQPPVQTQPQTQSQPPQFQQKSSSGADLPSPDSVSSDSSLSNAMSRQKPVIYQEQVHIQSGTTRVLSNPVDPKLNLSDPHGRIQVQQHVQDPGYLLQQQFEHQHHQQQFEHQQQQQQQQQPQHQPQHQPQQQFIHGGHFIHHNPAIPTYYPVYPSQQQPHHQVYYVPARQPQAYNLSMQQANMGESATAIPSGRPQNPPNPTTLVQPNAAYNPIRNTPLPKTEMTAAAYRAATQGNPQFVQVPASQHQQQYVTYSQIHHPSQSMAPNSTAPANYAYEYADPAHAQIYYSQPLAPTMPSQYQTMQGATMMQPEVSAQHPSDGMKQQIRTTQPL 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01525 709 MobiDBLite consensus disorder prediction 380 422 - -
Car04g01525 709 ProSiteProfiles PB1 domain profile. 54 161 IPR000270 GO:0005515
Car04g01525 709 SUPERFAMILY CAD & PB1 domains 70 169 - -
Car04g01525 709 SMART PB1_new 69 161 IPR000270 GO:0005515
Car04g01525 709 MobiDBLite consensus disorder prediction 218 276 - -
Car04g01525 709 Pfam PB1 domain 70 160 IPR000270 GO:0005515
Car04g01525 709 MobiDBLite consensus disorder prediction 254 275 - -
Car04g01525 709 MobiDBLite consensus disorder prediction 31 47 - -
Car04g01525 709 CDD PB1_UP2 58 159 - -
Car04g01525 709 MobiDBLite consensus disorder prediction 477 508 - -
Car04g01525 709 PANTHER EXPRESSED PROTEIN 13 700 - -
Car04g01525 709 Gene3D - 74 160 - -
Car04g01525 709 MobiDBLite consensus disorder prediction 351 422 - -
Car04g01525 709 PANTHER OS05G0427100 PROTEIN-RELATED 13 700 - -
Car04g01525 709 MobiDBLite consensus disorder prediction 1 49 - -
Car04g01525 709 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01525 Car-Chr4 15556210 15558983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01525 54 189 MAP Kinase Kinase Kinase AT5G57610 41.176 1.75e-24 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01525 - - mtr:MTR_1g109470 1001.5