Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01473 ATGGCTATCCATCAACAACATAATCAAAACGTTTCATCTCTTCTTGATTCTCTTTACTGTGATGAAGAAAAATGGGAAGATGAAGATAATGATAATGAAGAACAAAGTGATGTaacaacaacaacaacaacaaACATTGCTGTTGTTCACTTGAACTCTACTTCTCTGTTTCCTCTGCTTTTCTTGGAACAACACTTGTTTTTTCAAGATGAAGAACTTAACTCTCTTTTCACCAAAGAGAAAACTCAACAACAATCTTATGAGGATCTGATGAAAAATGTGGATTTTGACTCAACAAAATCACTTATTTCTCAGCCTCGTCGTGAAGCTGTTCAATGGATTCTTAAAGTCAATGCTCATTATGGATTCTCTGCTCTTACTGCAACACTTGCTGTTACTTATTTTGATAAGTTCCTTTTGAGTTTCCATTTTCAAAAAGAGAAGCCATGGATGATTCAGCTTGTTGCTGTTACTTGTATCTCTTTAGCTGCTAAAGTTGAAGAAACTCAAGTTCCTCTTCTTTTAGACCTTCAAGTGCAAGACACTAAATATGTGTTTGAGGCAAAGACTATTCAAAGAATGGAGCTTTTGATTCTTTCAACATTGAAATGGAAGATGCATCCAGTGACACCACTTTCTTTTCTAGATCACATTATAAGAAGGCTTGGATTGAAAACAAATCTTCACTGGGAATTTCTAAGGCGATGTGAGAATCTTATTTTATCTCTACTTTTAGATTCAAGATTTGTTGGTTGTCTTCCTTCTGTTTTGGCCACTGCTACAATGCTGCATGTTATAGACCAGATTGAACAGAGTGATGATGGTTTGGACTACAAAAATCAGCTTCTTGGTGTTCTCAAAATCAACAAGGAGAAAGTAGATGAATGTTATAATGAGATTATCCAAGTAACAAATTGCAACAACCTTAGTAGTACTAAACGAAAGTATGATGAAATCCCTGATAGCCCAAGTGGCGTAATTGATGCTGTTTTTAGCTCTGATGGTTCCAACGATTCATGGTCAGTGGGGTCATCACTCTATTCAACCTCAGAGCCTTTGTTAAAGAAGACCAAAACTCAAGGACAAAACATGAATTTGTCACCTCTTAATAGTGTCATTGTTGGAATTCTTGCCACCTCTCCTTAA 1146 0.3543 MAIHQQHNQNVSSLLDSLYCDEEKWEDEDNDNEEQSDVTTTTTTNIAVVHLNSTSLFPLLFLEQHLFFQDEELNSLFTKEKTQQQSYEDLMKNVDFDSTKSLISQPRREAVQWILKVNAHYGFSALTATLAVTYFDKFLLSFHFQKEKPWMIQLVAVTCISLAAKVEETQVPLLLDLQVQDTKYVFEAKTIQRMELLILSTLKWKMHPVTPLSFLDHIIRRLGLKTNLHWEFLRRCENLILSLLLDSRFVGCLPSVLATATMLHVIDQIEQSDDGLDYKNQLLGVLKINKEKVDECYNEIIQVTNCNNLSSTKRKYDEIPDSPSGVIDAVFSSDGSNDSWSVGSSLYSTSEPLLKKTKTQGQNMNLSPLNSVIVGILATSP 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01473 381 Pfam Cyclin, N-terminal domain 84 206 IPR006671 -
Car04g01473 381 PANTHER CYCLINS 40 357 IPR039361 -
Car04g01473 381 SMART cyclin_7 112 200 IPR013763 -
Car04g01473 381 CDD CYCLIN 107 199 IPR013763 -
Car04g01473 381 PANTHER CYCLIN D3.1 PROTEIN 40 357 - -
Car04g01473 381 SUPERFAMILY Cyclin-like 67 207 IPR036915 -
Car04g01473 381 Pfam Cyclin, C-terminal domain 209 316 IPR004367 -
Car04g01473 381 ProSitePatterns Cyclins signature. 107 138 IPR006671 -
Car04g01473 381 Gene3D - 88 207 - -
Car04g01473 381 Gene3D - 208 300 - -
Car04g01473 381 SMART Cyclin_C_2 209 325 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01473 Car-Chr4 14957723 14960638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01473 1 303 Core Cell Cycle Gene Families AT4G34160 55.049 6.01e-111 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01473 K14505 - gmx:547740 530.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01473 04 14957723 14960638 Car04g01473 04 14957723 14960638 ECH
Car05g02763 05 72724747 72726832 Car04g01473 04 14957723 14960638 ECH