Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01458 ATGGGTAGCCTTGATGTGGAAAGAACAACAGTTGGATGGGCTGCAACAGACCCTTCAGGAATTCTAGCTCCATACACTTACACTCTCAGAAACACGGGACCGGATGATGTTTACATCAAAATTCATTACTGTGGAATCTGTCATACTGATGTCCACCAAATCAAAAATGATCTTGGCATGTCCAATTATCCTATGGTTCCAGGGCATGAAATGGTTGGTGAAGTACTTGAGGTGGGTTCAAATGTTACGAGGTTCAGTGTTGGAGAAATTGTGGGAGTTGGACTCCTCGTTGGTTGCTGCAAAAGCTGCAGAGCATGTGAATCTGATATTGAACAATACTGTAACAAGAAGATCTGGTCTTACAATGATGTTTATACCGACGGAAAAGCCACTCAGGGTGGTTTTGCTGAAGCCACCGTCGTTGAGCAAAAATTTGTTGTGAAAATACCAGAGGGATTGGCGGCAGAGCAAGTTGCACCATTGTTATGTGCGGGTGTGACAGTGTACAGTCCACTTTCACATTTTGGGTTGAAACAGAGTGGGCTAAGAGGTGGAATATTGGGCCTTGGTGGAGTGGGCCACATGGGGGTGATAGTAGCAAAAGCAATGGGTCACCATGTAACTGTGATAAGTTCTTCTGATAAGAAGAAAAAAGAGGCACTTGAAGATCTTGGAGCTGATGATTTTCTTGTTAGCTCAGACACCATTCGCATGCAAGAAGCTGCTGATTCACTTGATTATATCATTGACACTGTACCTGTTGGTCACCCTCTTGAGCCTTATCTCTCATTGCTCAAACTTGATGGCAAATTGATCTTGATGGGTGTTATTAACACCCCTCTTCAATTCCTTACCCCCATGGTCATGATTGGGAGGAAGACAATCACTGGAAGCTTTGTTGGGAGCATAAAGGAGACAGAGGAGATGTTGGAGTTTTGGAAAGAGAAGGGTTTGAGTTCTATGATTGAAATTGTGACTATGGATTACATTAACAAAGCATTTGAAAGATTGGAGAAGAACGATGTGAGGTATAGGTTCGTTGTGGATGTCAAAGGAAGCAAACTTGACGAGTGA 1074 0.432 MGSLDVERTTVGWAATDPSGILAPYTYTLRNTGPDDVYIKIHYCGICHTDVHQIKNDLGMSNYPMVPGHEMVGEVLEVGSNVTRFSVGEIVGVGLLVGCCKSCRACESDIEQYCNKKIWSYNDVYTDGKATQGGFAEATVVEQKFVVKIPEGLAAEQVAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVIVAKAMGHHVTVISSSDKKKKEALEDLGADDFLVSSDTIRMQEAADSLDYIIDTVPVGHPLEPYLSLLKLDGKLILMGVINTPLQFLTPMVMIGRKTITGSFVGSIKETEEMLEFWKEKGLSSMIEIVTMDYINKAFERLEKNDVRYRFVVDVKGSKLDE 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01458 357 CDD CAD1 11 349 - -
Car04g01458 357 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Car04g01458 357 Gene3D - 13 350 - -
Car04g01458 357 PANTHER ALDEHYDE REDUCTASE 4 355 - -
Car04g01458 357 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 4 355 - -
Car04g01458 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Car04g01458 357 Pfam Zinc-binding dehydrogenase 191 312 IPR013149 -
Car04g01458 357 Pfam Alcohol dehydrogenase GroES-like domain 34 149 IPR013154 -
Car04g01458 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Car04g01458 357 SUPERFAMILY GroES-like 16 181 IPR011032 -
Car04g01458 357 Gene3D - 164 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01458 Car-Chr4 14806809 14809465 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01458 1 357 Monolignol Biosynthesis Gene Families AT3G19450 76.536 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01458 K00083 - gmx:100777558 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01458 04 14806809 14809465 Car04g01458 04 14806809 14809465 ECH