Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01448 ATGGAGTCCAAGGAGCAACTTGTTGAAGTGGACCATTTGACAACACCAACAACAGGGACCAGTTTCTCTCAGTTACTATTAGCAGATGACAATGATGATGAGAATCAACAAAATGCATTGGGTCTCAGTACTACTGTGGACCAGACTACTTTTTCCACCCCCCTTTTCTCCATTCACAACACACCTAAAATGCTTTGTTTTGGTAACTATCATCCAAATGAAAGCGACTTTTTGCTTTCTGAAACCAACATCACTCCTCCTCAGAAATCTGTCATCACTTCAAGTGATTCTTCTTCTGCTTCTTCATGCAATCACACCAACACAACCTTCAATTCATTAACAACTAAGTCCAATTGTTTGCAGAAAAAGCGGAATGGGTCAGGAGGACAAGAAATTAGTACCAAGGCAGGTGTTGAAGGACAGAGAGGTCCTAAGAAGACCAAAGCAGAGAACCCCATTTCAACCGGACATGCAAAGAAAAAGGAGAAGCTTGGGGAACGAATTGCAGCATTACAACAACTTGTTTCTCCATTTGGCAAGACTGATACAGCTTCGGTGCTTCACGAGGCAACTGGTTATATAAGATTCTTACATGATCAAGTTCAGGTTCTCTGCTCTCCATACCTGCAACCTTCACAACACCTTCAATTTCAACATCAGCATGGGGACGGAGATAACAATGGAGAAGAAGTGAACAAGGATTTGAGGAGCAGGGGTTTGTGTTTGATCCCTGTAGGATGCACCTTACACGTGGCAAGTAGTAATGGTGCTGATTTTTGGTCACCAGCTTCAATAGGGAACAATGTTTCACCATCACCTATTGCTAAGCAGTAA 834 0.4257 MESKEQLVEVDHLTTPTTGTSFSQLLLADDNDDENQQNALGLSTTVDQTTFSTPLFSIHNTPKMLCFGNYHPNESDFLLSETNITPPQKSVITSSDSSSASSCNHTNTTFNSLTTKSNCLQKKRNGSGGQEISTKAGVEGQRGPKKTKAENPISTGHAKKKEKLGERIAALQQLVSPFGKTDTASVLHEATGYIRFLHDQVQVLCSPYLQPSQHLQFQHQHGDGDNNGEEVNKDLRSRGLCLIPVGCTLHVASSNGADFWSPASIGNNVSPSPIAKQ 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01448 277 CDD bHLH_AtbHLH_like 159 204 IPR045239 -
Car04g01448 277 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 60 255 - -
Car04g01448 277 Gene3D - 158 221 IPR036638 GO:0046983
Car04g01448 277 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 160 217 IPR036638 GO:0046983
Car04g01448 277 PANTHER BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED 60 255 - -
Car04g01448 277 MobiDBLite consensus disorder prediction 119 162 - -
Car04g01448 277 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 148 197 IPR011598 GO:0046983
Car04g01448 277 MobiDBLite consensus disorder prediction 141 162 - -
Car04g01448 277 MobiDBLite consensus disorder prediction 119 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01448 Car-Chr4 14715541 14718460 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01448 135 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 50.388 1.64e-33 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01448 - - mtr:MTR_1g107185 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01448 04 14715541 14718460 Car04g01448 04 14715541 14718460 ECH