Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01444 ATGATCGAGGGAGATGAAACAACTCTTATAACAACAGCCAAGGAACAACCAGGTGAAGTGATGGACAAAGATAAGAACAGTCATGAAGGAAGTGAAGATGACAATCCCAAAGAGTGGTTAAACCTGAGTTTAGGAGGCACTTCACTTCCAACAGCTGGAGACCCTGATTCACAATCAAGACCAACCAAAGTTTTTTCATGCAACTTTTGCATGAGGAAGTTCTTTAGTTCACAAGCATTAGGAGGTCACCAGAACGCCCACAAAAGGGAAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAGAGGTGCTGCCAGAAGATATCAATCTCAGAGTCAGAGAACTATGGCACTAATGGGTTTGTCCATGAACAATCCAATGCTTCGATCACTTGGTGTCCAGCCCCATGCACTAGTGCACAAGCCATGCAGAGGTGGAACTATGGTGGCTTCGAGCTTTCAAGAAGCACATGCAGCAGGCCTCGGAATGGCATGTACACCTTTCATGTCTGAGAATCGTACTGATCTAGTATGGCCAGGCAGCTTTTGGATGGTTCCACAACAGCCCCAACCTCCACATGAGTCGCTCAAGCTTGATTTAGACCTCAGACTCTGA 669 0.4051 MIEGDETTLITTAKEQPGEVMDKDKNSHEGSEDDNPKEWLNLSLGGTSLPTAGDPDSQSRPTKVFSCNFCMRKFFSSQALGGHQNAHKRERXXXXXXXXXXXXXXXXXXXXXXXXXXXERGAARRYQSQSQRTMALMGLSMNNPMLRSLGVQPHALVHKPCRGGTMVASSFQEAHAAGLGMACTPFMSENRTDLVWPGSFWMVPQQPQPPHESLKLDLDLRL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01444 222 ProSitePatterns Zinc finger C2H2 type domain signature. 67 87 IPR013087 -
Car04g01444 222 ProSiteProfiles Zinc finger C2H2 type domain profile. 65 92 IPR013087 -
Car04g01444 222 MobiDBLite consensus disorder prediction 17 36 - -
Car04g01444 222 PANTHER ZINC FINGER PROTEIN 4-LIKE 119 222 - -
Car04g01444 222 PANTHER ZINC FINGER PROTEIN 4-LIKE 7 92 - -
Car04g01444 222 Coils Coil 119 120 - -
Car04g01444 222 MobiDBLite consensus disorder prediction 41 61 - -
Car04g01444 222 Coils Coil 89 91 - -
Car04g01444 222 Gene3D Classic Zinc Finger 52 102 - -
Car04g01444 222 SUPERFAMILY beta-beta-alpha zinc fingers 62 92 IPR036236 -
Car04g01444 222 PANTHER ZINC FINGER PROTEIN 4-LIKE 119 222 - -
Car04g01444 222 PANTHER ZINC FINGER PROTEIN 4-LIKE 7 92 - -
Car04g01444 222 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01444 Car-Chr4 14692303 14692971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01444 63 169 C2H2 Transcription Factor Family AT1G80730 39.252 1.11e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01444 - - ahf:112779836 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01444 04 14692303 14692971 Car04g01444 04 14692303 14692971 ECH