Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g01432 ATGCTGCGTTTGTGCTTCACCCCTCTCGATTATTGCTTCCGACGTCGCGGTGCCTCCGATTTTCTTCTCTGGCACACCGACTTGAAACCTCACGCCTCCGGTGATTTCTCCATCGCTGTTGCTCAGGCTAATTACAGCCTTGAAGATCAGAGTCAAGTATTTACCTCCCCTTCTGCCACCTACGTCGGTGTCTACGACGGACACGGTGGTCCCGAAGCTTCTAGATTTGTCAACAACCGTCTATTCCCCTATTTACACAAGTTTGCTTCTGAGCAAGGGGGATTGTCAGTGGATGTGATAAAAAAGGCGTTTAGTGCAACTGAAGAGGACTTCTTGCATTTGGTTAAGTTATCGTTACCCGTTAGTCCCCAGATTGCATCTGTGGGATCGTGTTGTCTTCTTGGTGCAATTTCTAATAATGTGTTGTATGTTGCCAACCTCGGAGACTCCAGAGTTGTTCTTGGCAGGAAGTATTCTGAGAGCAAGAATTGTCCGGTGGAGGCTGTGCGCTTGTCAACAGATCATAATGTAGCCGATGAGGAGGTCAGGAGAGAAGTTGAAGCTCTACATCCTGACGATTCACACATAGTGGTTTATAGCCGTGGAGTTTGGAGGATTAAGGGAATCATACAGGTGTCTAGATCTATTGGTGATGTGTATTTGAAGAGACCAGACTTCTACAGAGACCCCATTTTTCGGCAATTCGGAAATCCTATTCCTTTGAAGCGTCCTGTAATGACAGCCGAACCATCAATCATTATTAGAGAGCTTGAATCAGACGATTTATTCTTAATATTCGCTTCAGATGGCCTTTGGGAACAATTAAGTGACGAAACAGCAGTTGATATTGTTTTCAAATATCCAAGAGCTGTGAGTGTCTTCGATTACTTGTACTCTGCGCATAATACAGTTTCATTATTTTTACATGGTTTTCTGTTTGTATTATTATACCTGCAGGGAATTGCCAAGAGACTAGTAAGAGCTGCTCTTCAGGAAGCTGCAAAGAAGAGAGAGATGAGATATGCTGATATAAAGAAAATTGACAAAGGAATTAGACGACACTTCCATGATGATATTACTGTTGTTGTAATCTATCTTGATCACCATGAAGGTTCTTCTAGTGGTAGATTTAAGCAAACTGCTGTTACAACTGCCCCTATTGATATATTTTCCCTAAATGGTGATGAAGCAGAGAAGAGTATGCTCGGTTCTGTTGCTTAA 1221 0.4292 MLRLCFTPLDYCFRRRGASDFLLWHTDLKPHASGDFSIAVAQANYSLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNNRLFPYLHKFASEQGGLSVDVIKKAFSATEEDFLHLVKLSLPVSPQIASVGSCCLLGAISNNVLYVANLGDSRVVLGRKYSESKNCPVEAVRLSTDHNVADEEVRREVEALHPDDSHIVVYSRGVWRIKGIIQVSRSIGDVYLKRPDFYRDPIFRQFGNPIPLKRPVMTAEPSIIIRELESDDLFLIFASDGLWEQLSDETAVDIVFKYPRAVSVFDYLYSAHNTVSLFLHGFLFVLLYLQGIAKRLVRAALQEAAKKREMRYADIKKIDKGIRRHFHDDITVVVIYLDHHEGSSSGRFKQTAVTTAPIDIFSLNGDEAEKSMLGSVA 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g01432 406 SUPERFAMILY PP2C-like 44 368 IPR036457 -
Car04g01432 406 ProSiteProfiles PPM-type phosphatase domain profile. 35 366 IPR001932 -
Car04g01432 406 Pfam Protein phosphatase 2C 56 284 IPR001932 -
Car04g01432 406 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 319 401 - -
Car04g01432 406 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 4 290 - -
Car04g01432 406 PANTHER ALPHABET, ISOFORM E-RELATED 319 401 - -
Car04g01432 406 PANTHER ALPHABET, ISOFORM E-RELATED 4 290 - -
Car04g01432 406 CDD PP2Cc 48 366 IPR001932 -
Car04g01432 406 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Car04g01432 406 Gene3D - 26 374 IPR036457 -
Car04g01432 406 SMART PP2C_4 29 364 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g01432 Car-Chr4 14581969 14584714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g01432 17 373 PP2C-type Phosphatase Gene Family AT3G51370 52.877 4.25e-136 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g01432 - K01102 gmx:100812137 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01432 04 14581969 14584714 Car04g01432 04 14581969 14584714 ECH